Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0928 ATGAATTCGAATTATGGCAAATCCAACCAGCAGAAAGGATCTGCTGCCTCTCTGAACAACTTCAATTTCGACTTTGCTCTCGGGATCGGATCGAACCGACCCAAATCTCTCAACGATCAGAAAAACCATACCACGTCCAATTCATATTTTACTTCTTCCTCCACATTCCCGTCTACTCAACCAAGACCCTCTTGGCAACCGGGCAAACCATCATGGACTCACCAGCCGTCGCCCAGTCTGGCGGCTCAGCCCGGTTTGCCCGGTGGGCCTGTTTCAATGGTTGGGGATATCTTCGGCAAGAGCTGGGGATCGACTCAGCCTTCGGTTACGAAATCGAGTATCGGAACTATTAACAAAGATCCTAATCTCTTTGGGGATTTGGTTGGCTCTGCTTTAGGGCAGAGTTCTAAGAGTAGCAGCAATGTTCCCCTGAAAAATGCTACACCTATTGCAAAGGCATCCAGTACTGCATCGAACCAGAGTTCATTTTCCATGGGGAACATGACTGATTCTTTGCCTAAAAATAGTAGTACGGTTCAAAGCAATGGAAGTTGGGGATCTTCTGGAAATACAGGGAGCTATTCCAGCGGCTACAATAGTAATAGTACTATGACCTCCAATAAAAGCACCAGTATAGGGGGTCCTTCATTGCGCAGTGTGAATGCTGGAGGTGGTGTAGTTGGTAGTGGAATGAGTTCTAATAAAGATCCATTTGGTTCTTTGGCTGGTTTTGGATCCAAACAGTCTAGTAGTCTTAATTCAGCTAGCAAAGCAAAAGGGAATGATACAGGGGATGATGGTTTTGGACATTTTCAGAATGCTTCTAAACCAAGCTCTACTACATTCCCATCAAGTAGTTCAACAGCAAATAATATCAATCTTAATGGATCTGGATCTTTGAGCCAGAAACCTATGCAAACTTCTGGTAGTGATCCATTGGACATGTTCTTCTCGAGTTCCTCGGCCGCATCTGGAAGTGCTTCTGTGGCCTCTGAAGGATTTGGAGGACAGCCTTCTTCAGAAGTTGATGATTGGGGCATAGATTCTGAATTTGGTGGGGGAGGCCATGATGTGGCTGGAACAACCACTGAGCTTGAAGGACTTCCCCCTCCTCCAGCTGGTGTATCTGGTTCTGCAGCGAAAAGCAAGGGGCTGGAAAATTACAAGCAGGGACAATATGCTGATGCCATAAAGTGGCTTTCCTGGGCTACCATCCTTCTTGAGAAATCAGGTGATAATGCAGGCACTACGGAAGTTTTGTCATGCAGGGCTTCATGTTTCAAAGAAGTTGGGGAGTACAAGAAAGCAGTAGCAGATTGTACAAAGGTTCTTGAGAACGATGAAACCAATGTATCCGTTCTTGTACAACGTGCTCTTTTGTATGAGAGTATGGAAAAGTACAGACTTGGTGCTGAGGACCTGAGAACTGTTCTGAAGATCGATCCTGGTAATAGGGTTGCAAGAAGTACCATCCACCGATTGAATAAGATGGCTAATTAG 1500 0.4553 MNSNYGKSNQQKGSAASLNNFNFDFALGIGSNRPKSLNDQKNHTTSNSYFTSSSTFPSTQPRPSWQPGKPSWTHQPSPSLAAQPGLPGGPVSMVGDIFGKSWGSTQPSVTKSSIGTINKDPNLFGDLVGSALGQSSKSSSNVPLKNATPIAKASSTASNQSSFSMGNMTDSLPKNSSTVQSNGSWGSSGNTGSYSSGYNSNSTMTSNKSTSIGGPSLRSVNAGGGVVGSGMSSNKDPFGSLAGFGSKQSSSLNSASKAKGNDTGDDGFGHFQNASKPSSTTFPSSSSTANNINLNGSGSLSQKPMQTSGSDPLDMFFSSSSAASGSASVASEGFGGQPSSEVDDWGIDSEFGGGGHDVAGTTTELEGLPPPPAGVSGSAAKSKGLENYKQGQYADAIKWLSWATILLEKSGDNAGTTEVLSCRASCFKEVGEYKKAVADCTKVLENDETNVSVLVQRALLYESMEKYRLGAEDLRTVLKIDPGNRVARSTIHRLNKMAN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0928 499 MobiDBLite consensus disorder prediction 29 92 - -
Acco04g0928 499 MobiDBLite consensus disorder prediction 33 80 - -
Acco04g0928 499 Gene3D Tetratricopeptide repeat domain 377 499 IPR011990 GO:0005515
Acco04g0928 499 PANTHER OS03G0340700 PROTEIN 1 498 - -
Acco04g0928 499 MobiDBLite consensus disorder prediction 239 316 - -
Acco04g0928 499 MobiDBLite consensus disorder prediction 198 217 - -
Acco04g0928 499 SMART tpr_5 417 450 IPR019734 GO:0005515
Acco04g0928 499 SMART tpr_5 377 410 IPR019734 GO:0005515
Acco04g0928 499 SMART tpr_5 451 484 IPR019734 GO:0005515
Acco04g0928 499 MobiDBLite consensus disorder prediction 243 260 - -
Acco04g0928 499 MobiDBLite consensus disorder prediction 151 192 - -
Acco04g0928 499 SUPERFAMILY TPR-like 379 493 IPR011990 GO:0005515
Acco04g0928 499 MobiDBLite consensus disorder prediction 272 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0928 Acco-ChrAcco04 8384803 8386754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0928 392 496 Calmodulin-binding Proteins AT3G25230 33.333 1.50e-10 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0928 04 8384803 8386754 Acco04g0928 04 8384803 8386754 ECH