Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0927 ATGTGTGGGGGCGCTATCATTTCCGACTTCGTTTCCGTCAAGCGAGGCCGGAACATCACCGCCGGCGACCTTTGGGCTGAGCTCGACCCTTTCTCCGACCTCCTTGGCTTCGATACTACCGCCGCTTCTGCCAAAAGCCAACCGCCTCAGAAACTCCCTCAAGTCTCCATCAATAAAGGGGCGTGTGAGAAGGAGGAGAAGAAAAGCGTGAGCGCTGGGAAAGCTGGCGGGACGAAGAGCACTGGTCAGAGAGCACGCAAGAACGTTTACAGAGGAATAAGGCAGAGGCCGTGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACACAAGGGCGTGAGGGTGTGGCTGGGCACCTACAACACCGCCGAGGAAGCCGCCAGGGCCTACGACGAGGCCGCCAAGCGCATCCGCGGGGACAAGGCCAAGCTCAACTTCTCCGCCACACCACAAGAGCCACCCGCCAAGAAGCGCTGCCTGAGCCAGGAGGTAAGCGAAGGGAGCAGCCACCAGACGGAGGTACCGACACCGTATCAGGCGGATCTGGAGCTGAAGCAGCACATATCAAACCTGGAGTCGCTGCTGGGGCTGGAGCCGGAGGCAGAGACGAGCGAGCTGCAGCAGGCTGTGAGTGGCACAGGAAGCAGTGACAGCGGCGATTGGGCGGAGTCGGTGGACCTGTGGATGCTGGACGACGTCATGATGAATCAGATGCCAATTAGCAGTGGGCTGTTGTACTAA 738 0.603 MCGGAIISDFVSVKRGRNITAGDLWAELDPFSDLLGFDTTAASAKSQPPQKLPQVSINKGACEKEEKKSVSAGKAGGTKSTGQRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTYNTAEEAARAYDEAAKRIRGDKAKLNFSATPQEPPAKKRCLSQEVSEGSSHQTEVPTPYQADLELKQHISNLESLLGLEPEAETSELQQAVSGTGSSDSGDWAESVDLWMLDDVMMNQMPISSGLLY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0927 245 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700|GO:0006355
Acco04g0927 245 MobiDBLite consensus disorder prediction 145 173 - -
Acco04g0927 245 FunFam Ethylene-responsive transcription factor 2 88 147 - -
Acco04g0927 245 MobiDBLite consensus disorder prediction 42 86 - -
Acco04g0927 245 MobiDBLite consensus disorder prediction 201 220 - -
Acco04g0927 245 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Acco04g0927 245 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Acco04g0927 245 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Acco04g0927 245 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Acco04g0927 245 PANTHER DNA-BINDING DOMAIN 56 185 IPR044808 GO:0003700|GO:0009873
Acco04g0927 245 SUPERFAMILY DNA-binding domain 89 146 IPR016177 GO:0003677
Acco04g0927 245 Pfam AP2 domain 89 138 IPR001471 GO:0003700|GO:0006355
Acco04g0927 245 CDD AP2 90 145 IPR001471 GO:0003700|GO:0006355
Acco04g0927 245 MobiDBLite consensus disorder prediction 203 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0927 Acco-ChrAcco04 8376492 8378071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0927 1 233 AP2-EREBP Transcription Factor Family AT3G16770 43.590 4.45e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco04g0927 AP2 2.8e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0927 04 8376492 8378071 Acco04g0927 04 8376492 8378071 ECH