Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0922 ATGGCGTCGGACTCGGAGGGATCGGGGTCCGGGGGCTCTTCCCGGTACGTTCATCTCCCACCGCATCCTCCGCCGACTATAACGCCACCCGTCGCTTCGTTCCGGCAGGGCGGCCCTGAGCCCGCTCGGATTTTCGATGAATTGCCTAAAGCTACCATTGTCTCCGTCTCTCGTCCCGACGCTGGCGACATCAGCCCCATGCTTCTTTCTTATACCATTGAATTTGAATTCAAACAATTCAAGTGGCAGTTGGTGAAGAAAGCTTCTCAAGTGATTTATTTACATTTTGCATTGAAGAAACGTGCATTTATTGAGGAAATTAATGAAAAGCAGGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAAAACACCACTGTGGAGCATGATGATGAAGTAGATGATGAAACTATCTTGCATCATGATGATAGTGCTAAAGACAGGGACGTTCCATCTATTGCTGCATTACCAATCATACGGCCAGCCTTAGGTGGGCAGCAGTTTGTCTCAGACAGAGCGATGGTTGCTATGCAAGGATATCTCAATCACTTTTTTGGAAATATTAGTATCGTTAATTCTCCAGAGGTTTGCAAGTTTTTGGAGGTCTCAAAGTTATCATTCTCACCTGAATATGGCCCCAAGTTGAAAGAAGAATACATAATGGTGAAGCATCTGCCAAACATTTCAAAGGATGATGGTTCTAGACAATGTTGTACTGTTCAATGTTTCAGTTGTTGCAATGACAACTGGCAAAAGGTTTGGGCTGTACTAAAACCTGGATTCTTGGCATTTCTGGCAGATCCTTTTGATACCCAGCCTTTGGACATTATTGTTTTTGATGTACTTCATACCTCAGATGGGGATATAACAGGTTGTCCATCTCTAGCAACAGAAATGTTGGAACCAAACCCTTTACGCTATTCATTCAAGGTGACTTCTGGCAATCGGAGCATTAGGGTAAGAGTAAAGAGTAGTGATAAAGTTAAAGATTGGGTCGCTGCCATAAATGATGCTGGAGTAAAACCTCCTGAAGGCTGGTGTCATCCTCACCGCTATGGTTCCTTTTCTCCTCCAAGAGGCTTGATTGAAGATGATAGTCAGGCTCAATGGTTTGTAGATGGTCAGGCAGCATTTGAAGCCATTTCTTCTTCAATTGAGGAAGCAAAATCGGAGATATATATTTGTGGGTGGTGGCTGTGCCCAGAACTGTATTTGCAGCGACCTTTTCACTCTCATGCTTCATCAAGGCTTGATAATTTGCTAGAATCAAAGGCTAAGCAAGGGGTTCAGATTTTTATTCTTCTCTACAAAGAAGTGGCTATTGCTTTGAAAATAAACAGTATTTACAGCAAGAAAAAGCTTCTCAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGATCACTTTTCTAGTGGCGTTTACCTGTGGTCCCACCATGAAAAACTAGTTATTGTGGATCACCAGATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACCCCTGAGCACAGAGTGGGAGATTTCCCTCCTTTAATCTGGCCTGGGAAGGACTATTATAATCCTAGGGAATCTGAACCAAACTCATGGGAAGATACAATGAAAGATGAAGTAGATCGTGGAAAATATCCTCGTATGCCATGGCATGATGTCCACTGTGCTGTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCAAAAAGGAACAAAGCTCCATATGAGCAAGCAATACCGTTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAAAGACAAAGAATTGGAGATTGAAACCGAGAAACCTATCAATCATCATAGAAGAATGATAAGGGATGATTCATTTTCCTTATCTCCGTCCCAAAATATTCCTCTGCTTTTGCCTCAGGAATCTGATAAGCCACATAATCCTAAAGGACACCCAGAATTAAATGGGTTAAGCACCTTTTCTAATCTCAATCGGCCAATCAAGATGAGTGCTGGTCTTCCTCCTCTTTATCAGAAGGGCAAAATTCAACCAGTTGGTTCAGATACACCAAGGAAAGACATTGTGGATGAGATTGATTATATTCATGAAAGTGGGGAAATGTCTCAAAATAGAGTTGCTTGTGTCAGCTCAAAAGGCACAGTTCCTGAATGGTGGGAAGCACAAGAACGGGGTGATCAGGGAGGCTTTGTTGATGAATTTGGACGAGTTGGTCCTCGTTCTTCCTGCTGCTGTCAGGTTATTAGGAGTGTTAGTCAATGGTCTGCTGGGACAAGCCAAACTGAACAGAGCATCCACAATGCTTATTGCTCTCTAATTGAGAAAGCTGAACACTTCATCTACATAGAGAATCAATTTTTTATCTCAGGTCTTTCAGGAGATGAGACCATACAAAATCGTGTGTTAGAGGCTTTATATCAACGGATTATGCGAGCTTACAAAGATCAAAAAATTTTTAGGGTTTTAATTGTCATCCCACTACTTCCTGGCTTCCAGGGAGGCCTTGATGATAGTGGTGCAGCATCTGTTAGAGCCATAATGCATTGGCAATATCGAACCATTTGCCGAGGACCAAAATCAATATTGCATAATCTCTGTGATCTCCTGGGTGCAAAAGCCCATGACTACATATCTTTCTTCGGCCTCAGGAATTATGGAAGACTCTCTGATGGTGGTCCGGTGGCAACCAGCCAGGTTTATGTTCACAGTAAAATCATGATAGTTGATGACCGTACAGCTTTGATAGGATCTGCTAATATTAATGATAGAAGTTTACTTGGCTCTAGAGACTCTGAGATTGGTGTTGTAATAGAAGACAGAGAGTCGACTGGATCATATATGGGTGGAAAGCCGTGGAAAGCAGGGAAGTTTGCGCTGACTCTTCGACTGTCATTATGGTCGGAACACTTGGGTCTCCAACCAGGAGAGATTGATCAAATAGCAGACCCAATTGTTGAGTCTACTTATAAAGAAATTTGGACGGCAAGAGCAAAGAAAAATACTGCAATTTACCAAGATGTCTTTTCTTGCGTTCCAAATGATATGATACACACCAGAGTTGCTTTCAGACAAAGCACAGCTCGCTGGAAAGAAAAAATTGGCCACACAACTATTGATATAGGAATTGCCCCAAAAGTGTTAGAATCCATTCATAATGGAGCTATCAAGGACACTGATCCCTTGGAGAGATTAGCCTCAGTGAAGGGTCATCTTGTTTCTTTTTCGTTGCAGTTCTTGTGTCGGGAAAATTTAAAACCTGCCTTCAATGAAAGCGAGTACTACGCTTCTCAAGTCATAACGAGGGTGACACGTTCCTCAGATTTTGCAGGCAATGCAAGCAACACTAACACTATTATCATATATCACTATTACTGGGATTCAAAGTAG 3423 0.4236 MASDSEGSGSGGSSRYVHLPPHPPPTITPPVASFRQGGPEPARIFDELPKATIVSVSRPDAGDISPMLLSYTIEFEFKQFKWQLVKKASQVIYLHFALKKRAFIEEINEKQEQVKEWLQNLGIGENTTVEHDDEVDDETILHHDDSAKDRDVPSIAALPIIRPALGGQQFVSDRAMVAMQGYLNHFFGNISIVNSPEVCKFLEVSKLSFSPEYGPKLKEEYIMVKHLPNISKDDGSRQCCTVQCFSCCNDNWQKVWAVLKPGFLAFLADPFDTQPLDIIVFDVLHTSDGDITGCPSLATEMLEPNPLRYSFKVTSGNRSIRVRVKSSDKVKDWVAAINDAGVKPPEGWCHPHRYGSFSPPRGLIEDDSQAQWFVDGQAAFEAISSSIEEAKSEIYICGWWLCPELYLQRPFHSHASSRLDNLLESKAKQGVQIFILLYKEVAIALKINSIYSKKKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPEHRVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDEVDRGKYPRMPWHDVHCAVWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGKDKELEIETEKPINHHRRMIRDDSFSLSPSQNIPLLLPQESDKPHNPKGHPELNGLSTFSNLNRPIKMSAGLPPLYQKGKIQPVGSDTPRKDIVDEIDYIHESGEMSQNRVACVSSKGTVPEWWEAQERGDQGGFVDEFGRVGPRSSCCCQVIRSVSQWSAGTSQTEQSIHNAYCSLIEKAEHFIYIENQFFISGLSGDETIQNRVLEALYQRIMRAYKDQKIFRVLIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGPKSILHNLCDLLGAKAHDYISFFGLRNYGRLSDGGPVATSQVYVHSKIMIVDDRTALIGSANINDRSLLGSRDSEIGVVIEDRESTGSYMGGKPWKAGKFALTLRLSLWSEHLGLQPGEIDQIADPIVESTYKEIWTARAKKNTAIYQDVFSCVPNDMIHTRVAFRQSTARWKEKIGHTTIDIGIAPKVLESIHNGAIKDTDPLERLASVKGHLVSFSLQFLCRENLKPAFNESEYYASQVITRVTRSSDFAGNASNTNTIIIYHYYWDSK 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0922 1140 Gene3D Endonuclease Chain A 723 966 - -
Acco04g0922 1140 CDD PLDc_vPLD1_2_yPLD_like_1 370 514 - -
Acco04g0922 1140 Gene3D - 246 343 IPR011993 -
Acco04g0922 1140 PANTHER PHOSPHOLIPASE D 165 1102 IPR015679 -
Acco04g0922 1140 Pfam Phospholipase D Active site motif 477 504 IPR001736 GO:0003824
Acco04g0922 1140 MobiDBLite consensus disorder prediction 1 29 - -
Acco04g0922 1140 Coils Coil 100 120 - -
Acco04g0922 1140 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824
Acco04g0922 1140 SUPERFAMILY Phospholipase D/nuclease 752 954 - -
Acco04g0922 1140 SUPERFAMILY PH domain-like 248 340 - -
Acco04g0922 1140 SMART pld_4 909 936 IPR001736 GO:0003824
Acco04g0922 1140 SMART pld_4 477 504 IPR001736 GO:0003824
Acco04g0922 1140 PIRSF PLD_euk 58 622 IPR016555 GO:0004630|GO:0006654|GO:0048017
Acco04g0922 1140 PIRSF PLD_euk 715 1112 IPR016555 GO:0004630|GO:0006654|GO:0048017
Acco04g0922 1140 CDD PLDc_vPLD1_2_yPLD_like_2 769 953 - -
Acco04g0922 1140 SMART PH_update 216 344 IPR001849 -
Acco04g0922 1140 Pfam PLD-like domain 782 955 IPR025202 -
Acco04g0922 1140 ProSiteProfiles PH domain profile. 251 342 IPR001849 -
Acco04g0922 1140 CDD PH_PLD 193 340 - -
Acco04g0922 1140 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 909 936 IPR001736 GO:0003824
Acco04g0922 1140 FunFam Phospholipase 743 963 - -
Acco04g0922 1140 Gene3D Endonuclease Chain A 362 599 - -
Acco04g0922 1140 SUPERFAMILY Phospholipase D/nuclease 328 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0922 Acco-ChrAcco04 8309507 8321799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0922 1 989 Phospholipase D Gene Family (Wang group) AT3G16785 69.880 0.0 1335