Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0889 ATGAGACTCCCCTTATATTTTGTTGGATCTGTGAAAGCTAGTAACGAGCTCATCGACTGCAATTTTTGGGATATTCATTTGTTAGGCGAGATCCCCATGAATTTTCAGGCATTGAAGATCCAAATTTGTTGTAAGTGGAAGCACAGTGAAAAACTTCTCGACTCTGAAAAGGCTGGAGCTCGTTTACTGGGTTGCTCTTTCCGGGTTAAAAATCTTCCAATCATTCAAGCTGTAGTTACAAAGGACAGAATGTCAAAAGGAACTAGTGTGGTGCTGGACTCACCTGAAAATGGCGATGATATTGGCACCATTGAAGAAACCCCAGAGGAGTCAATTTTGTCACGACAGACTTCTGTGAACCTTGTTCCTTTTATTGGTCAAAGATTTGTTTCTCAAGAAGCTGCTTATGAATTTTACTGCAGTTTTGCAAAACAATGTGGCTTTTCAATTAGACGACATCGCACTCGAGGAAAGGATGGGGTTGGTCGGGGAGTTACTAGAAGAGATTTTACTTGCCATCGTGGTGGTTATCCTCAGATTAAGCCATCTGATGATGGAAAGATGCAAAGGAATCGCAAATCTTCTCGTTGCGGCTGTCAAGCATACATGCGTATTGTCAAAAGGGCAGATTTTGATGTCCCTGAATGGCGAGTGACAGGCTTTAGCAACATCCATAATCATGAGTTATTAAAATCCAATGAGGTGCGTCTTCTTCCAGCATACTGTACTATATCTCCAGATGACAAGAGCCGTATATGCATGTTTGCCAAAGCTGGAATGTCAGTGAGGCAAATGTTAAGATTGATGGAGCTTGAGAAAGGCATCAAACTTGGTTGTTTGCCTTTCACAGAGATTGACGTGAGAAACCTGTTGCAGTCATTTAGAAATGTTGATAGAGACAATGATGCTATTGATCTTATTGCTATGTGCAAGAGATTGAAAGATGAAAATCATAACTTCAAGTATGAGTTTAAGATTGATAGTAATAACAGGCTAGAGCATATTGCCTGGTCTTATGCCTCATCTATTCAACTGTATGAGTCATTTGGAGATGCTGTGGTTTTTGATACAACACACCGTCTGGATGCCTATGACATGTTGTTGGGAATTTGGCTTGGAGTGGACAATCATGGAATGACTTGTTTCTTTGGTTGCACAATTCTGCGGGATGAAAATATTCAGTCTTTTTCATGGGCTCTAAAGGCATTCTCAAGCTTTATGGAAGGAAAAGCTCCACAAACCATGTTAACTGATCATAACATGTGGCTGAAAGAAGCCATTGCTGTTGAAATGCCTGAAACCAAGCATGCCTTTTGCATATGGCACATTATTGCAAAGTTCTCTGACTGGTTCTCTGTTCTTCTTGGATCACACTATGATGAGTGGAAAGCTGAGTTCCATCGGCTCTACAATTTGGAACTGGTGGAAGATTTTCAGGAAGGGTGGGGGCTAATGGTTGATAAATATGGACTCCATGCAAATAAGCACATTGTTAGCCTATACTCATTAAGGACATTTTGGGCTTTACCATTCTTGAGGTGCTACTTCTTTGCGGGATTGACCAACACAAGTCAATCTGAGTCCATTAATGCTTTCATCCAACGGTTCTTGGGTGCCCAATCTCAACTAGATCACTTTGTAGAGCGTGTTGCTGACATTGTTGAATTTAATGACCGGGCTGGATCAAAGCAAAAGCTGCAACGCAAACTGCAGAAAGGGTGCCTTAAAACTGGTTCACCTATCGAATCCCATGCTGCCACAATGCTTACTCCTTATGCCTTTAATAAACTGCAGGATGAGCTAGTTTTGGCGCCACAATATGCATCATTTCTGGTTGATGAAGGTTGCTTTCAGGTCAGACACCACACTCAGATGGATGGAGGATGCAAAGTATTTTGGGTTCCCTGCCAAGAACACATGAGCTGCAGCTGCCGTCTGTTTGAGTATTCAGGCATCTTGTGCAGACATATATTAAGAGTTATGTCAAATAACAACTGTTTTCACATTCCTGACCAATATGTACCTGCCCGTTGGCGTAGTACCTGTTCATCTTCTGCTAACCCCTTCCGGGGTACCACTTCCAGGGATCATTCTGAAAGAATACAATTTTTGGAATCCATGGCTTCAACGCTTGTCATGGAATCCATTGAAACAGAGGAACGCCTCAGTACTGCCTGCGAGCAAATGTCTATGGTTCTATCGCGTATCAAAACCCTTCCTAGGTCAACACATGGGGTGAATGATATTGCATATAATTATCAATCAGATTCATTGATTCTGCCGGAGGTGGATGATGCTGATGGTATAATTCATGGTTTCACAATTGCAAATCCCCATGATTCTATCACTTTAGGGAAACTAAAGGAGAGAAGGGCCAGAGATGGAGTTGATATAAGTAGGAAGCGAAGACATATTTCAGGGCCATTGTGTGGGCAATATGAACATGATGCATCTGATTGCTCAACAATGGCCGGTGATAATTTGAATGGAGATGCACTAAGGTACTCGTAG 2511 0.4194 MRLPLYFVGSVKASNELIDCNFWDIHLLGEIPMNFQALKIQICCKWKHSEKLLDSEKAGARLLGCSFRVKNLPIIQAVVTKDRMSKGTSVVLDSPENGDDIGTIEETPEESILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDGKMQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFSNIHNHELLKSNEVRLLPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENHNFKYEFKIDSNNRLEHIAWSYASSIQLYESFGDAVVFDTTHRLDAYDMLLGIWLGVDNHGMTCFFGCTILRDENIQSFSWALKAFSSFMEGKAPQTMLTDHNMWLKEAIAVEMPETKHAFCIWHIIAKFSDWFSVLLGSHYDEWKAEFHRLYNLELVEDFQEGWGLMVDKYGLHANKHIVSLYSLRTFWALPFLRCYFFAGLTNTSQSESINAFIQRFLGAQSQLDHFVERVADIVEFNDRAGSKQKLQRKLQKGCLKTGSPIESHAATMLTPYAFNKLQDELVLAPQYASFLVDEGCFQVRHHTQMDGGCKVFWVPCQEHMSCSCRLFEYSGILCRHILRVMSNNNCFHIPDQYVPARWRSTCSSSANPFRGTTSRDHSERIQFLESMASTLVMESIETEERLSTACEQMSMVLSRIKTLPRSTHGVNDIAYNYQSDSLILPEVDDADGIIHGFTIANPHDSITLGKLKERRARDGVDISRKRRHISGPLCGQYEHDASDCSTMAGDNLNGDALRYS 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0889 836 Pfam MULE transposase domain 353 445 IPR018289 -
Acco04g0889 836 Pfam SWIM zinc finger 641 662 IPR007527 GO:0008270
Acco04g0889 836 Pfam FAR1 DNA-binding domain 137 230 IPR004330 -
Acco04g0889 836 ProSiteProfiles Zinc finger SWIM-type profile. 632 665 IPR007527 GO:0008270
Acco04g0889 836 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 117 733 IPR031052 GO:0006355
Acco04g0889 836 SMART 26again6 640 667 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0889 Acco-ChrAcco04 7957281 7960904 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco04g0889 MULE 4.5e-20 CL0219