Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0837 ATGGGAACTACACCACCAGAAGAGCTTCTTAGGAAGATCGAAAATCTCGAGGCGGGTCAAGCACACCTCAAGCAAGAAATGTCCAAGCTCAAGCTCTCGGGCGCAAGCGATGCTCGGGCCGAGCAGAGCCATCATCGCCAGAGGTCTCACTCGATATCGCCGCAACGTTCGAGATTGGGTGTGCCCAGTAGGAAAGCCGGAGGCGGCGGATTCGATGGACCGGCTTCGTGGAAGAAAGGTTTGACTTCGTTTAAACATTCATCACCGCTTCAGAGGGAAAGCCGTAGTAGTGATCCTCAAAATGATGGAGAAGGAGGCGTTGGAAGAGGCCCTTCGGCTGTGAATTTTACTGAGAAGCAGTATCTCAATATTTTGCAGTCAATGGGGCACTCTGTTCACATATTGGATCTTACCGGTCGTATTATATACTGGAACCGTAGTGCTGAACATCTATATGGTTATTCGTCGGACGAAGCCCTTGGTAAGGATGGCATTCAGCTCCTTGTAGACCCCAGCGATTTTGCCCTAGTCAATGATATAATCAACCGGGTCACTATGGGAGAGAAATGGCTTGGGCAGTTCCCTGCCAAAAATAAGATGGGAGAAAAGTTTTTGCCAGTGGCTACCAATTCTCCTTTATATGACGATGATGGAAGTTTGATTGGCATTATTTGTGTCTCTAGTGATTCACGACCCTTCCTTGAAGCAAGAGTTCCGTTCTCAGGAATAAAGCACTTTGAAACAGGTTCAGGCTCCAGCAATCTTAGAAGTACCATTACAAATAAACTTGGTCTTGATTCTCAACAGCCTCTTCAAGTTGGTATAGCATCAAAAATTACAAATTTGGCGTCCAAGGTAAGCAACAAAATGAAGTCAAGAATCCGAACAGGGGAAAATAATGTGGATCGTGAAGGTGGGAGTGGTGAAAGTCATCACTCTGAGCAGAGCTGCTCAGATATGGTTCTTCCAGACCAGAGAGAAGATGCTAATTCTAGTGGAGCTAGCACACCCAGGGGAGATGTTCCCCCACATGCCTTTGGTGTATTTTCTCACACAGAAGACAAAAGTCAAGGAAACTGTTTTAGAGATTCTGGTGATGAGGGTGAAGGAAAACCTATTCATAAAGTCTTCACTTCTAAGGCTGAAGCATGGATTCAAAAGAAAACACTATCATGGCCATGGAGAGCAAGTGAACGGGATGGGTCAGAGGGAAGGAATGTTCGTGTTGGTTGGCCTTGGTTGCAGAATGATCAAGAAAATGAGCCAGCTCAGCAGAAGCCTCTTTCTTCTTGTGTGAGGCCAGAAAGTCAGGCAGGAGAAGGTAATCAACCTGTTAATAATGAAGCATCAGGATCCTGGTCCTCCTTCAATGTTAACAGCACTAGTAGTGCAAGCAGCTGTGGGAGTGGCAGCAGTACTGTCAATAATAAATTGGACATGGATACTGATTGTTTGGATTATGAAATTTTGTGGGAAGACCTGAAAATTGGAGAACAAATTGGGCAAGGATCATGTGGAACTGTGTATCATGCTCTGTGGTATGGATCAGATGTTGCAGTTAAGGTATTCTCCAAGCAAGAATATTCTGATGATGTGATAATGTCCTTCCGACAAGAGGTATCTGTCATGAAAAGACTTAGACATCCAAATGTCCTTTTGTTCATGGGGGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTTTCACTTACTTCAGAGAAACACAGCCAAACTTGACTGGAGACGGCGTGCTCATATGGCTTTAGATATTGCACGGGGTGTAAACTATCTTCATCACTGCAGTCCACCTATTATTCATCGAGATTTGAAGTCTTCAAATCTTCTAGTTGACAAGAACTGGACAGTGAAGGTTGGTGATTTTGGCCTTTCACGCCTAAAGCATGAAACATTTCTCACAACAAAGACAGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCCTCTGACGAGAAGTCTGATGTATACAGCTTTGGAGTGATATTGTGGGAACTTACTACTGAGAAGATCCCATGGGAGACTCTCAACTCAATGCAGGTGATTGGAGCTGTTGGGTTCATGAACCAGCGGCTAGAAATTCCAAAGGATGTTGATCCCAAGTGGGCTGCTATAATTGAGAGCTGCTGGCATAGTGATCCAGCCTGCCGGCCAACATTGCAGGAATTGCTGGAAAGGCTTCGAGAGCTGCATAGACGTTATGCCCTTCAATTTCAAGCAGCTCGTACTGCTGGTGCTGAAAACGCTCAAAAGGAGTCCTAA 2319 0.4554 MGTTPPEELLRKIENLEAGQAHLKQEMSKLKLSGASDARAEQSHHRQRSHSISPQRSRLGVPSRKAGGGGFDGPASWKKGLTSFKHSSPLQRESRSSDPQNDGEGGVGRGPSAVNFTEKQYLNILQSMGHSVHILDLTGRIIYWNRSAEHLYGYSSDEALGKDGIQLLVDPSDFALVNDIINRVTMGEKWLGQFPAKNKMGEKFLPVATNSPLYDDDGSLIGIICVSSDSRPFLEARVPFSGIKHFETGSGSSNLRSTITNKLGLDSQQPLQVGIASKITNLASKVSNKMKSRIRTGENNVDREGGSGESHHSEQSCSDMVLPDQREDANSSGASTPRGDVPPHAFGVFSHTEDKSQGNCFRDSGDEGEGKPIHKVFTSKAEAWIQKKTLSWPWRASERDGSEGRNVRVGWPWLQNDQENEPAQQKPLSSCVRPESQAGEGNQPVNNEASGSWSSFNVNSTSSASSCGSGSSTVNNKLDMDTDCLDYEILWEDLKIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFHLLQRNTAKLDWRRRAHMALDIARGVNYLHHCSPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETFLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWETLNSMQVIGAVGFMNQRLEIPKDVDPKWAAIIESCWHSDPACRPTLQELLERLRELHRRYALQFQAARTAGAENAQKES 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0837 772 Gene3D Transferase(Phosphotransferase) domain 1 573 758 - -
Acco04g0837 772 MobiDBLite consensus disorder prediction 417 454 - -
Acco04g0837 772 Coils Coil 13 33 - -
Acco04g0837 772 FunFam PAS domain-containing protein tyrosine kinase family protein 572 763 - -
Acco04g0837 772 SMART pas_2 119 186 IPR000014 -
Acco04g0837 772 ProSiteProfiles PAS repeat profile. 117 188 IPR000014 -
Acco04g0837 772 SMART serkin_6 494 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0837 772 CDD STKc_MAP3K-like 500 746 - -
Acco04g0837 772 NCBIfam PAS domain S-box protein 118 229 IPR000014 -
Acco04g0837 772 FunFam PAS domain-containing protein tyrosine kinase 487 571 - -
Acco04g0837 772 ProSiteProfiles Protein kinase domain profile. 494 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0837 772 MobiDBLite consensus disorder prediction 81 96 - -
Acco04g0837 772 Pfam Protein tyrosine and serine/threonine kinase 494 746 IPR001245 GO:0004672|GO:0006468
Acco04g0837 772 MobiDBLite consensus disorder prediction 290 372 - -
Acco04g0837 772 MobiDBLite consensus disorder prediction 26 112 - -
Acco04g0837 772 SUPERFAMILY Protein kinase-like (PK-like) 481 746 IPR011009 -
Acco04g0837 772 PRINTS Tyrosine kinase catalytic domain signature 568 581 IPR001245 GO:0004672|GO:0006468
Acco04g0837 772 PRINTS Tyrosine kinase catalytic domain signature 673 695 IPR001245 GO:0004672|GO:0006468
Acco04g0837 772 PRINTS Tyrosine kinase catalytic domain signature 717 739 IPR001245 GO:0004672|GO:0006468
Acco04g0837 772 PRINTS Tyrosine kinase catalytic domain signature 607 625 IPR001245 GO:0004672|GO:0006468
Acco04g0837 772 PRINTS Tyrosine kinase catalytic domain signature 654 664 IPR001245 GO:0004672|GO:0006468
Acco04g0837 772 MobiDBLite consensus disorder prediction 356 372 - -
Acco04g0837 772 Pfam PAS fold 120 227 IPR013767 GO:0006355
Acco04g0837 772 SUPERFAMILY PYP-like sensor domain (PAS domain) 117 229 IPR035965 -
Acco04g0837 772 Gene3D Phosphorylase Kinase; domain 1 487 571 - -
Acco04g0837 772 MobiDBLite consensus disorder prediction 412 454 - -
Acco04g0837 772 CDD PAS 132 229 IPR000014 -
Acco04g0837 772 MobiDBLite consensus disorder prediction 291 310 - -
Acco04g0837 772 Gene3D PAS domain 130 232 - -
Acco04g0837 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Acco04g0837 772 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 188 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0837 Acco-ChrAcco04 7383057 7389734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0837 1 768 MAP Kinase Kinase Kinase AT3G06620 61.019 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Acco04g0837 PK_Tyr_Ser-Thr 5.7e-66 CL0016