Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0800 ATGGCTGCAAACAATGGCAGTACGGATCTCTCTCCCTCAGAAGCCTCTAGCATCTCAGGAGGGTCCAAAGGAGAAGGATCCAGAGAAGAAGTGATCGAAAACCAGAAGATGAAGATGGTTCAAATTACCAGCAGCAACGACGAGTCTCTTCCTAAATCGAAGATGGAGCTGGATTTCTTCAAATCTAAAGGGAACATTATAGGTTCTTCATCTTCATCCAAAACAAACGTTATTAACAACAACAATGGAAAAGACCATGAATATGAAAATCTTGATGATGATCATGAGAAGAACAGTACAACAGAAAGGACTTTTTGTTGCAACTTTTGCAAAAGAGAGTTTTCTTCTTCACAAGCCCTAGGAGGCCATCAAAACGCACATAAACAAGAGCGTGCAATTGCAAAACGACGACAAGCTGGGATCGTTTCGGATCATCATTTTGGTTACTTTGGGAATCACTATTATTCTCCACACTATCCTAGTTATTATGGTGGTAATTACCCTAATTATCACTCTAATCCTCTGGTTAATAGCCCTTCGATCAATTGTAATAGGCCACTTGGGGTTAGAATAGACTCCATGATTCATAAGCCTGTTGCTTCTTATAACCCTAATTTTAGGTTTAGGCATGATCATCAAACCCTAGATAGGTTTGGGATTAGGGCAAGTTCTGGAACTTTGAGGGTTAATGAAGAAACTAGTGATACTAGTCCTCCAACTCGTTATCAACAGTTTATGCATAATCCTTCTTCTTCTTCAACTGCTGCTACTAATGATGATCAACATATCAAGTTTATTCCAGAAGAAGCTCCCATAAAAGATGGAGACGACGGCGATCTTGATCCTTCAGGTCTTGATTTGTCCCTTAAGCTTTAA 876 0.3973 MAANNGSTDLSPSEASSISGGSKGEGSREEVIENQKMKMVQITSSNDESLPKSKMELDFFKSKGNIIGSSSSSKTNVINNNNGKDHEYENLDDDHEKNSTTERTFCCNFCKREFSSSQALGGHQNAHKQERAIAKRRQAGIVSDHHFGYFGNHYYSPHYPSYYGGNYPNYHSNPLVNSPSINCNRPLGVRIDSMIHKPVASYNPNFRFRHDHQTLDRFGIRASSGTLRVNEETSDTSPPTRYQQFMHNPSSSSTAATNDDQHIKFIPEEAPIKDGDDGDLDPSGLDLSLKL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0800 291 Pfam C2H2-type zinc finger 105 129 - -
Acco04g0800 291 ProSitePatterns Zinc finger C2H2 type domain signature. 106 127 IPR013087 -
Acco04g0800 291 ProSiteProfiles Zinc finger C2H2 type domain profile. 105 132 IPR013087 -
Acco04g0800 291 MobiDBLite consensus disorder prediction 247 291 - -
Acco04g0800 291 MobiDBLite consensus disorder prediction 70 97 - -
Acco04g0800 291 Gene3D Classic Zinc Finger 81 147 - -
Acco04g0800 291 MobiDBLite consensus disorder prediction 1 23 - -
Acco04g0800 291 MobiDBLite consensus disorder prediction 262 280 - -
Acco04g0800 291 SUPERFAMILY beta-beta-alpha zinc fingers 100 132 IPR036236 -
Acco04g0800 291 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 9 291 IPR044246 GO:0009788
Acco04g0800 291 MobiDBLite consensus disorder prediction 1 35 - -
Acco04g0800 291 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0800 Acco-ChrAcco04 7030543 7032176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0800 99 291 C2H2 Transcription Factor Family AT5G10970 33.663 2.52e-15 72.8