Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0786 ATGGCACAAGAACACAACGTCAAGTCGGAGGTTTCGCCGAGATCTTCTGTTCCGATCTTTGGCCAAGTTCGGGTTTCTTCTGAAACAATTTATACTGGAACGTGCCGCTTTGAAACGGCTGAGAGTTGTTCTGAGATAATTAAGGATCCTGTCATGGAGTTCATCCCAAATGTTCGATCTGGTAGCCATGCTGATATTGGACCACGGCCATCTATGGAGGATGAACACATTCGAATGGATGATCTCGCTTCCCATCTTGGACTGGTGTTCAAATCCCCAATACCGTGTGCATTTTATGCAGTTTTTGACGGCCATGGAGGGCCTGAGGCAGCCTATTTTGTCAAGAGGAATGTTATGAGACTATTGTTTGAAGATGCTAATCTGCTGCTGTCATATGATACTGATGCATTATTTCTAGAGAGATTGGAGGATTCCCATCGGAACGCTTTCTTACTTGCAGATCTTGCCTTGGCTAACGAAGCCACTGTTAGTAGTTCCTGTGGGACAACAGCATTGACTGCACTTATACTTGGAAGTCATTTACTGATTGCAAATGCTGGTGATTGTCGGGCAGTTCTTTGCAGAAGAGGAGTTGCTGTTAACTTGTCTCATGATCATAGAATGGGTTATTTCCCAGAAAAGAGAAGAGTGGAAGAGTTGGGCGGCTTCTTTGATGGTTTTGGCTATCTCAATGGTTATCTGGCTGTGACCCGAGCCCTTGGGGATTGGTATTTAAAACTTCCACTTGGTTCTCCTTCACCTCTTATTGCTGACCCAGATGTTCGACAGGTTTCATTGACTGAGGGTGATGAGTTTTTGATCATTGGGTGTGATGGGATTTGGGATGTGATGACTAGTCAGGAAGCAGTTAGTTTTGTTCGCCGTAGGTTGAGGTGGCATGGTGATCCGCAGCAATGTGCTACAGAGCTGGTCAATCAAGCACTGTGCAGGAATCCAACAGATAATCTCACTGTGATTGTTATATGCTTGTCCTCCATTGGAAGCATCGCTGAATCACTTCCACCCCATAGGCGAAGATTCAGAGCTCGTTCTCTTTCTGAAGAGGCTCGTAAAAATTGA 1080 0.4519 MAQEHNVKSEVSPRSSVPIFGQVRVSSETIYTGTCRFETAESCSEIIKDPVMEFIPNVRSGSHADIGPRPSMEDEHIRMDDLASHLGLVFKSPIPCAFYAVFDGHGGPEAAYFVKRNVMRLLFEDANLLLSYDTDALFLERLEDSHRNAFLLADLALANEATVSSSCGTTALTALILGSHLLIANAGDCRAVLCRRGVAVNLSHDHRMGYFPEKRRVEELGGFFDGFGYLNGYLAVTRALGDWYLKLPLGSPSPLIADPDVRQVSLTEGDEFLIIGCDGIWDVMTSQEAVSFVRRRLRWHGDPQQCATELVNQALCRNPTDNLTVIVICLSSIGSIAESLPPHRRRFRARSLSEEARKN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0786 359 ProSitePatterns PPM-type phosphatase domain signature. 98 106 IPR000222 GO:0043169
Acco04g0786 359 SMART PP2C_4 49 328 IPR001932 -
Acco04g0786 359 Gene3D - 48 333 IPR036457 -
Acco04g0786 359 ProSiteProfiles PPM-type phosphatase domain profile. 59 330 IPR001932 -
Acco04g0786 359 Pfam Protein phosphatase 2C 67 322 IPR001932 -
Acco04g0786 359 SUPERFAMILY PP2C-like 51 332 IPR036457 -
Acco04g0786 359 CDD PP2Cc 58 330 IPR001932 -
Acco04g0786 359 PANTHER PROTEIN PHOSPHATASE 2C 48 328 IPR015655 GO:0004722|GO:0006470
Acco04g0786 359 SMART PP2C_SIG_2 74 330 IPR001932 -
Acco04g0786 359 FunFam Probable protein phosphatase 2C 22 42 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0786 Acco-ChrAcco04 6827139 6828911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0786 34 357 PP2C-type Phosphatase Gene Family AT1G48040 60.550 2.56e-131 379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0786 04 6827139 6828911 Acco04g0786 04 6827139 6828911 ECH