Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0766 ATGGAGGCTAAATTTCGGGGGAAGAATCAGTACGTCTATGGACCTGTGGTGCCGGAAATGAAAGCGGTTGGAAAGAAGAGTTTGGAGTGGAATTTGGAAGACTGGAAATGGGATGGAGATCTTTTCACTGCTAGTCCACTAAATTCAGCTCCATCTGATTGTAGAAATAGGCAGTCTTTCCCAGTTGATTCTGAAATTCCTGTGGAAGCTAATACTTCAAACATTTTATCTTCTAATTGGGATGACGTCAACCCAGAGAAAGGAAAGAGAGAATTGGAAAAAAGGAGGAGAGCTGTGGTATCTGAAGGTGATGAGCTGAATGATGAAGCTGGTTGTCTTAATTTAAATCTTGGGGCTCAAATTTACCCTATCATGGAAGGGGATGAAAAAAGCGGAAAGAAGACAAAGATAGTTGGGAGTGGGACTACTTCAAACCGAGCGGTTTGTCAGGTGGAAGATTGTAGGACCGATCTTGGTAATGCAAAAGATTACCACCGCCGGCATAAGGTTTGTGATATGCATTCCAAGGCCAGCAAAGCACTGGTAGGAAATGTTATGCAGCGTTTCTGTCAACAGTGCAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAGGGGAAAAGAAGTTGTCGGAGGCGTTTGGCAGGCCACAATAGGAGGAGGAGGAAGACACACCCTGACGCTGTTGTAAATGGAGGCTCCCTGAATGACGAAAGGGGCAGCAGCTATCTGTTAACAAGTCTTCTCCGTATACTGTCCAATATGCACTCAAATGGCTCAGATGCTGCTAAGGACCAAGATATTCTCTCTCATCTGCTAAGGAATTTGGCAAGTCTGGCTGGTACAATCAATGGAACGAACATAGCCTCCTTATTGGAGGGATCCCAAGGTTTGGTGAATGCTGGGGCATCTGGAACTTCCCAAAAAGTGCTGAATATAAATTCAAATGGCCCTGATCCCATCAGATCACCTGGTTCTTCCATCAAGACAGATAATGGTCTCAGCCGTCAGGACCCTCCAAAGCCTCTGGGACAGTCTGAGACAGTGCCTGCATGTGATATGGCGCAAAAATGTTTACCTTCAGGTGATATTGGGGTTGGAAGTTTAAAATCTCCTTCAGGATTACAGCCTTCAAATGTGCTTCTGACAAGGGATGGCCTTCCACCCCAATCAGTTGCGGCTGAGACTACAGTTAGAAGGAACGGTTTAAATTGCATTGACCTCAATAACGTATATGATGACATACAAGATGATGCTGAGAATCTTAGGAAGTCTCATCCACCTGGGGCTTCAGGTATTGGATCTCTTAATCATCCTTCATGGTTACAACTTGACACTCAAAAGTCAAGTGCACCACAGACAAGCAGAAACTCAGATTCAACCTCCTCTCAGTCACCTAGTTCTAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTCAAACTCTTTGGCAAGGATCCAAATGATTTTCCCCTTGTTCTTCGATCACAGATTCTCAGCTGGTTATCCCACAGTCCCACAGAGATTGAGAGCTATATAAGGCCAGGCTGCATCATTTTAACAGTATATCTCTGTCTAGGAAAATCTGCATGGGAGGAGCTCTGCTGTAATTTAGGGCTCAGCTTGAAAAAGCTTATTGCTGCATCAAATGATCCTTTCTGGACGACGGGGTGGGTATATGCAAGAGTGCAGCATTCTGTAGCCTTTTTGTACAATGGTCAGGTTGTTTTAGACGTTCCCTTGAGCCTTAGAAGCCCACAACACTGTAGGATTTCATGTATTAAACCACTTGCCGTTTCTTCAATGGCAACTACTCAATTTGTTGTCAAAGGTGTCAACCTGTTCCATTCTAGCACAAGGTTGCTCTGTGCACTTGAAGGGAAGTATCTGGTACAGCATAGTTGTTGTGACTTGATTGATGGTGTTGATACAGCTATTGAACATGATCAACATCAGTGCCTTAGCTTCTCTTGTACCATACCAAGTGTTACTGGGAGGGGATTTATTGAGGTGGAAGATCATGGTCTTAGCAGCTGTTCCTTTCCTTTTATTGTTGCGGAGCCAGCAATTTGTACAGAGATCCGTAATCTGGAGAGTGTGATTGAGGCGGTTGAGACCTGTAAAGATGTACAGATGAGAAGCAAACAAATGGAAGAAAGGACTCGAGCCTTGGATTTCATACAAGAAATGGGTTGGCTCCTTCATAGAAATCGTGTGAAAGCTAGGTTGGGTCCCATGGCACCTGTCCAGGATCTGTTCCAATTCAATCGGTTCAAGTGGCTTGTTGACTTCTGCATGGACCATGATTGGTGTGCTGTGATGAAAAAGCTTCTGGACATTGTGTTTGAGGGTACTGTTGATGCAGGAGAACTTACCTCTGTAGAGCTTGCATTGTTAGACTTGGGTCTTCTGCATAAAGCTGTGAGGAGAAATTGCAGGCCTATGGTGGAACTGCTGTTAAAATTCGTACCAGTTCTATCTTCAGATGATGACAGTAAGGAGAAACAAGTTGGCAAGCACTCTGACAGATTCTTATTTAAACCAGATAGTGCTGGCCCTGCTGGTTTGACCCCCCTTCATGTTGCGGCAAGCATGCATGGCTCAGAGAATGTATTGGATGCATTAACTGATGACCCTGGAATGGTGGGAATCAAGGCATGGAAAAATGCCCAGGACAAAACGGGTTTGACCCCAGAGGACTACGCATCCATGAGGAGCTACCACTCCTACATTGAACTCGTCCAGACAAAAACAAGCAAGAAAAGTGATGAGACTCATCACCATGTGCTCGACATCCCATATTCCCTTGTAGATAGTAACACAAAGAAGCAGCAAAAGTCATCATCAAAATTTTGGAGCTTGCAAACCGAGAAGATTGAAATGACAGCAGCAGCATCAACGATCCCACATCAGTGCGGGCTATGTCAGCACAAGCTGACTTGTCACAGCATGAGGACAGCACTTGTTTATAGGCCAGCAATGCTCTCAATGGTGGCCATTGCAGCTGTGTGTGTGTGTGTGGCTTTGCTCTTCAAAAGCTCGCCGCAAGTCTCCTATGTCTTCCAGCCCTTCACATGGGAATCATTAGGGTATGGCTCAATGTAG 3105 0.4496 MEAKFRGKNQYVYGPVVPEMKAVGKKSLEWNLEDWKWDGDLFTASPLNSAPSDCRNRQSFPVDSEIPVEANTSNILSSNWDDVNPEKGKRELEKRRRAVVSEGDELNDEAGCLNLNLGAQIYPIMEGDEKSGKKTKIVGSGTTSNRAVCQVEDCRTDLGNAKDYHRRHKVCDMHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHPDAVVNGGSLNDERGSSYLLTSLLRILSNMHSNGSDAAKDQDILSHLLRNLASLAGTINGTNIASLLEGSQGLVNAGASGTSQKVLNINSNGPDPIRSPGSSIKTDNGLSRQDPPKPLGQSETVPACDMAQKCLPSGDIGVGSLKSPSGLQPSNVLLTRDGLPPQSVAAETTVRRNGLNCIDLNNVYDDIQDDAENLRKSHPPGASGIGSLNHPSWLQLDTQKSSAPQTSRNSDSTSSQSPSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRSQILSWLSHSPTEIESYIRPGCIILTVYLCLGKSAWEELCCNLGLSLKKLIAASNDPFWTTGWVYARVQHSVAFLYNGQVVLDVPLSLRSPQHCRISCIKPLAVSSMATTQFVVKGVNLFHSSTRLLCALEGKYLVQHSCCDLIDGVDTAIEHDQHQCLSFSCTIPSVTGRGFIEVEDHGLSSCSFPFIVAEPAICTEIRNLESVIEAVETCKDVQMRSKQMEERTRALDFIQEMGWLLHRNRVKARLGPMAPVQDLFQFNRFKWLVDFCMDHDWCAVMKKLLDIVFEGTVDAGELTSVELALLDLGLLHKAVRRNCRPMVELLLKFVPVLSSDDDSKEKQVGKHSDRFLFKPDSAGPAGLTPLHVAASMHGSENVLDALTDDPGMVGIKAWKNAQDKTGLTPEDYASMRSYHSYIELVQTKTSKKSDETHHHVLDIPYSLVDSNTKKQQKSSSKFWSLQTEKIEMTAAASTIPHQCGLCQHKLTCHSMRTALVYRPAMLSMVAIAAVCVCVALLFKSSPQVSYVFQPFTWESLGYGSM 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0766 1034 MobiDBLite consensus disorder prediction 444 473 - -
Acco04g0766 1034 Coils Coil 89 109 - -
Acco04g0766 1034 MobiDBLite consensus disorder prediction 309 341 - -
Acco04g0766 1034 MobiDBLite consensus disorder prediction 213 234 - -
Acco04g0766 1034 Pfam SBP domain 149 222 IPR004333 GO:0003677
Acco04g0766 1034 SUPERFAMILY SBT domain 147 228 IPR036893 GO:0003677|GO:0005634
Acco04g0766 1034 Gene3D - 786 931 IPR036770 -
Acco04g0766 1034 SUPERFAMILY Ankyrin repeat 803 913 IPR036770 -
Acco04g0766 1034 MobiDBLite consensus disorder prediction 309 347 - -
Acco04g0766 1034 Gene3D - 139 210 IPR036893 GO:0003677|GO:0005634
Acco04g0766 1034 ProSiteProfiles Zinc finger SBP-type profile. 146 223 IPR004333 GO:0003677
Acco04g0766 1034 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 94 897 IPR044817 GO:0003677
Acco04g0766 1034 FunFam Squamosa promoter-binding-like protein 14 140 210 - -
Acco04g0766 1034 Coils Coil 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0766 Acco-ChrAcco04 6519649 6525855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0766 1 1033 SBP-box Gene Family AT3G60030 46.609 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco04g0766 SBP 3.1e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0766 04 6519649 6525855 Acco04g0766 04 6519649 6525855 ECH