Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0759 ATGACAATGGGGTTGAACTGGATATTCGGCATCAGCAAAATGGCATCTGATCTGAATTCAGGATTATCCAAGAAAACTTCTGTTTTTGGTTTGAAAGCATGGGAATTGATGGCAATGGCTGTTGGGTTGTTCATTATAATCATTCTTGTGGTTCTATCAATATGTCTTACAAAACGAAAGAAATCCAGAAAAATCAACAGCAGCATGCTCCCCTTTAGCCATATATCATCGGTTTCAGAAGAGATCAAAGAGATTAGAGTTGATCAAGTTTCGGCAAATAATCATGTGCAGAATGATTCTTTCGTGAGCTTGACTGACAAATTTAGTGACAAGGAGTCTGCAAAGGCTTTAATCCAAGTAAAGAATGGTGACAATCTCAATAATAGTCACTCAGGCTCATTTAATCATTTAGAGAAAGACGGTGTTGGCTCTCAATCAGGCGATGACAGTGGCTCTAAGACTAATTCTTCGTACAGCCCCTTGTCTGGTTTGCCTGAATTCTCTCAACTAGGCTGGGGTCACTGGTTCACATTAAGGGACCTAGAACTTGCAACAAACAGGTTTTCAAGGGACAATGTGATTGGGGAAGGAGGTTACGGAGTTGTTTATCAGGGCCAGCTAATCAATGGCAATCCTGTGGCCGTTAAGAAGATCCTCAATAATATAGGACAGGCTGAAAAGGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTTCGACACAAGAACTTGGTTCGACTTCTCGGATACTGCATTGAAGGCACTCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGCAATTTAGAACAGTGGCTACATGGAGCAATGCAGAAGCATGGGTATCTTACATGGGATGCTCGGATGAAAATTCTCCTCGGGACGGCTAAAGGGCTGGCTTACTTGCATGAGGCTATTGACCCAAAGGTTGTACACCGTGATATTAAGTCAAGCAATATTCTGATCGATGACAAGTTCAATGCCAAAATATCGGACTTTGGGTTAGCTAAGTTGATTGTTTCTGGGAAAAGTCATATCACAACTCGAGTAATGGGTACTTTTGGATATGTGGCTCCAGAATATGCTAATTCTGGCTTACTAAATGAGAAGAGTGATGTTTATAGCTTTGGTGTGTTGCTTCTTGAAGCCATTACTGGAAGAGACCCTGTGGATTATGGCCGACCAGCAGATGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTAGGAAATAAGCGTTCAGAAGAGGTGGTGGACCCAAAACTTGAGACTCGCCCATCAACAAGTGCTCTTAAACGAGTCCTTTTGACTTCGCTGAGGTGTGTTGATCCAGATGCTGGAAAAAGGCCAAAGATGAGCCAAGTTGTCCGCATGCTTGAATCAGAAGAATACCCTATACCTCGAGAGGATAGAAGGAGGCGAAAGAGTCAGGCGGGAATCGTGGAGACTTCTGATACAGAAAAGAGTGACAATCCGGAAAGCAGGCCAAATGAGAGAAGAAACCAGAGGAAATAG 1515 0.4277 MTMGLNWIFGISKMASDLNSGLSKKTSVFGLKAWELMAMAVGLFIIIILVVLSICLTKRKKSRKINSSMLPFSHISSVSEEIKEIRVDQVSANNHVQNDSFVSLTDKFSDKESAKALIQVKNGDNLNNSHSGSFNHLEKDGVGSQSGDDSGSKTNSSYSPLSGLPEFSQLGWGHWFTLRDLELATNRFSRDNVIGEGGYGVVYQGQLINGNPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMQKHGYLTWDARMKILLGTAKGLAYLHEAIDPKVVHRDIKSSNILIDDKFNAKISDFGLAKLIVSGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYGRPADEVNLVDWLKMMVGNKRSEEVVDPKLETRPSTSALKRVLLTSLRCVDPDAGKRPKMSQVVRMLESEEYPIPREDRRRRKSQAGIVETSDTEKSDNPESRPNERRNQRK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0759 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Acco04g0759 504 CDD STKc_IRAK 194 460 - -
Acco04g0759 504 MobiDBLite consensus disorder prediction 462 504 - -
Acco04g0759 504 SUPERFAMILY Protein kinase-like (PK-like) 172 466 IPR011009 -
Acco04g0759 504 Gene3D Phosphorylase Kinase; domain 1 166 263 - -
Acco04g0759 504 FunFam Putative receptor-like serine/threonine-protein kinase 264 475 - -
Acco04g0759 504 PANTHER OS01G0323000 PROTEIN 17 488 - -
Acco04g0759 504 Gene3D Transferase(Phosphotransferase) domain 1 264 476 - -
Acco04g0759 504 Pfam Protein kinase domain 189 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0759 504 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Acco04g0759 504 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0759 504 ProSiteProfiles Protein kinase domain profile. 188 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0759 504 FunFam Putative receptor-like protein kinase 170 263 - -
Acco04g0759 504 MobiDBLite consensus disorder prediction 446 504 - -
Acco04g0759 504 MobiDBLite consensus disorder prediction 123 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0759 Acco-ChrAcco04 6387751 6391916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0759 30 462 Trihelix Transcription Factor Family AT1G70460 40.449 2.69e-97 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Acco04g0759 Pkinase 5.7e-49 CL0016