Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0752 ATGGTGATCGTGAACCTTGGGAACAAGAACAACAACAAAGAGAAACAAGAACAGGGAATGCGACTTGGGAAATACGAGCTTGGTAGGACTCTGGGCGAAGGCAATTTCGGAAAAGTCAAATTAGCTAGGAATACCGATTCCGGCCAATCCTTCGCGGTTAAGATCCTCGAGAAGAAAAGGATCACTGACCTCAATATAACCAATCAGATTAAGAGGGAAATAGCCACCTTGAAGCTCTTAAAGCATCCGAACGTGGTCAGATTATACGAGGTCTTGGCTAGCAAGACCAAGATTTATATGGTCCTAGAGTACGTGACTGGAGGAGAATTGTTTGACAGGATCGCATCCAAAGGCAAACTTCCAGAAGCTGAAGGAAGGAAGCTTTTCCAGCAGTTGATTGACGGTGTTAGCTACTGTCATGATAAAGGGGTCTTCCACAGAGATCTTAAGCTGGAGAATGTGCTTGTCGATGCCAAAGGGAACATAAAGATAACCGATTTTGGCCTAAGTGCTTTACCCCAGCATTTTAGAGAAGATGGTTTGCTGCATACCACCTGTGGAAGTCCCAACTATGTGGCCCCTGAGATTCTTTCTAATAAAGGATATGATGGCGCAACATCAGATATATGGTCCTGTGGGGTCATCTTGTATGTTATCTTAACAGGATATCTTCCTTTTGATGATAGGAATCTTGCAGTTCTCTACCAAAAGATTTTTAAGGGAGATGTTCAGATGCCAAAATGGCTATCGCCTGGTGCCAAAAACATCATAAAGAGGATTCTTGATCCCAACCCTGCTACTCGGATAACAATGGCTGGCATCAAACAAGAGGAATGGTTCAAGCAGGGCTATATTCCAGCAAAGCCAGAGGATGAGGAAGAGGACGTATATATTGACGATCAAGCCTTTTCCATCCACGAAGTGGGTCACGAAACGGAAGATAGGAGTCCGGGATCACCAACCCTTATCAATGCATTTGAATTGATAGGGATGTCTTCATGCCTTGACCTCTCTGGCTTCTTCGAAAAAGAGGATGTCTCAGAAAGGAAGATAAGATTTACGTCCAACCTCTGCGCAAAGGACTTGATCGATAGGCTTGAAGACATTGTGACAGAAATGGGATTTAAAGTCCAAAAGAAAAATGGAAAAGTGAAAGTGATACAAGCGAACAAGGAGGCACGCAAAGGTCTAGGCAACCTCACAGTTGCAGCAGAGGTTTTTGAGATAAGCCCATCCTTGCATGTAGTAGAGTTGAGGAAATCCAATGGAGATTCTTCTGTATATAGACAGTTGTGCGAGAAGTTGTCAAATGATTTGGGGGTTCCGCCAAGAACCGGAGCACTCGTAGATGGACAGGCCCTCTAA 1365 0.4418 MVIVNLGNKNNNKEKQEQGMRLGKYELGRTLGEGNFGKVKLARNTDSGQSFAVKILEKKRITDLNITNQIKREIATLKLLKHPNVVRLYEVLASKTKIYMVLEYVTGGELFDRIASKGKLPEAEGRKLFQQLIDGVSYCHDKGVFHRDLKLENVLVDAKGNIKITDFGLSALPQHFREDGLLHTTCGSPNYVAPEILSNKGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQMPKWLSPGAKNIIKRILDPNPATRITMAGIKQEEWFKQGYIPAKPEDEEEDVYIDDQAFSIHEVGHETEDRSPGSPTLINAFELIGMSSCLDLSGFFEKEDVSERKIRFTSNLCAKDLIDRLEDIVTEMGFKVQKKNGKVKVIQANKEARKGLGNLTVAAEVFEISPSLHVVELRKSNGDSSVYRQLCEKLSNDLGVPPRTGALVDGQAL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0752 454 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Acco04g0752 454 Pfam Protein kinase domain 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0752 454 SUPERFAMILY Protein kinase-like (PK-like) 22 308 IPR011009 -
Acco04g0752 454 FunFam Non-specific serine/threonine protein kinase 18 320 - -
Acco04g0752 454 CDD CIPK_C 324 436 - -
Acco04g0752 454 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0752 454 Gene3D Transferase(Phosphotransferase) domain 1 16 321 - -
Acco04g0752 454 Gene3D Kinase associated domain 1, KA1 322 441 - -
Acco04g0752 454 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0752 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Acco04g0752 454 CDD STKc_SnRK3 24 279 - -
Acco04g0752 454 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 424 - -
Acco04g0752 454 Pfam NAF domain 320 379 IPR004041 GO:0007165
Acco04g0752 454 FunFam Non-specific serine/threonine protein kinase 16 104 - -
Acco04g0752 454 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Acco04g0752 454 FunFam Non-specific serine/threonine protein kinase 320 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0752 Acco-ChrAcco04 6300479 6305209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0752 88 440 CBL-interacting serine-threonine protein kinases AT3G17510 72.599 0.0 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco04g0752 Pkinase 2e-74 CL0016