Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0749 ATGACAAGAGAGACAAGTTTAGATGGAGAAATTATCACTAATCCTGTAGATGAAAGTCCTGAAAAAGTTCAGGGAGAGTCAGACAAGCATGAGGATTCAAAGAAGACAACGAAGGAAGAAGATGTAGACACCAAGACTGTACCTTTTTACAAGCTTTTCTCATTTGCAGATTCTTTGGATTATCTGTTGATGCTTGTGGGGACAGTTGGTGCTGTTGCAAATGGAATAGCTATGCCCTTATTGATTATATTCATTGGAGATACAATTGATGCTTTTGGAGGATCTGCAGACACCAAAGAAGTTGTCCATGAAGTTTCCAAGGTGTGTCTGAAATTCATATACTTGGGAGTTGGCGCCTTTCTCGCGTCATTTCTTCAGGTGACTTGTTGGATGATCACTGGAGAAAGACAGGCTGCAAGAATAAGAGGTTTATACCTGAAGACAATTTTGAGGCAGGACATTAGTTTCTTTGATAAGGAAACTAACACCGGTGAGGTTGTTGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGAGAGAAGGTAGGACAGTTCATACAGGGTGTGTCAAATTTTTTTGGGGGTTTTATCGTAGCATTCATTGAGGGATGGCTCTTAACTCTTGTCATGCTATCTTCTATTCCTCCTATTGTCTTTTCTGGTGCTTTGATGAGCATTGTTCTTGCCAAAGCGACAACCCAAGGACAAAAAGCTTATTCTGCTGCTGCAAATATAGTAGACCAGACTATTGGTTCTATCCGAACTGTTGCATCATTCACAGGGGAGAAGCAAGCTATAGCTAAATATGATCAGTTCTTGATTAAAGCGTACAGGACCAGTGTGCAAGAGGGACTTGCTTCTGGTTTGGGTTTTGGTTCAACCTATCTTCTTTTTTACTTCACTTATGGTTTGGCAGTATGGTATGGTGGAAAAATGGTTCTGGAGAAAGGATATACAGGAGGGAAGGTTATAACTGTAATTTTTGCAGTTATTACGGGCTCCTTGTCTCTGGGGCAGGCATCTCCAAGTCTAAGTGCTTTTGCTGCAGGACAAACTGCAGCCTCTAAGATGTTTGAAACAATAAAAAGGAAGTCAGACATCGATGCTTATGACACGACCGGCAAGCAGCTACACGATATACGTGGGGACATAGAACTGAGGGAAGTTTGCTTTAGTTATCCTGCGAGGCCGAATGAACCCATATTCAATGGATTTTCTCTCTCAATACCAAGCGGAACTACAACAGCTTTGGTAGGACAAAGTGGTAGTGGAAAGTCAACAGTTATTAGTCTAATAGAAAGATTCTATGATCCACAAGCTGGTGAAGTTCTCATTGATGGTATCAATATCAAAGAATTGCAGCTAAAATGGATGAGACAGAAAATAGGCCTTGTCAGCCAAGAACCAGTTTTGTTCACTTGTAGCATTAAAGAGAACATTGCTTATGGTAAGGATGGTGCAACAGATGAAGAAATCAGAGCTGCAGCTGAGCTTGCTTATGCTGCAAAATTCGTAGATAAACTTCCTCAGGGGTTGGACACAATGGTTGGTGAACATGGAACTCAGCTGTCTGGGGGTCAAAAGCAGAGGGTAGCCATAGCAAGAGCAATACTGAAAGACCCAAGAATTCTTCTTCTTGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAGAATAGTACAAGAGGCACTAGACAAAATAATGATAAACAGAACCACTGTTATTGTAGCACATCGCTTGAGTACTGTAAGGAATGCTGATATTGTTGCTGTTATTCAGCAAGGAAAAACAGTAGAAAAGGGTTCACATGCTGAGCTCACTAAGGACCCTGATGGAGCCTATAGCCAACTCATTAGATTGCAGGAAACAAAGGAGTCAGAAAATATTAATGCAAATGACACTGATAAGCCAGAAAGCATAATGAATTCCGAAAGGCAATCAAGCCAACGACTTTCTTCCATAAAATCTGTAAGTAGAGAGTCATCTGGACTTGGAAGAAGCAGTCGTCATTCATTCTCATTGCCATATGGTGTGCCTCCAACAAATGGACTCTTTGAAACGGCAGATGCAGAACATGAAGCTCCTTGTTCAGCAGATTCACCAAAACCTCCAGATGTGCCACTTTACCGCCTGGCTTATCTAAACAAACCTGAGATTCCAGTCTTGCTTATAGGGACTCTATTTGCCGCGGCAAATGCAGCAATATTCCCAGCTTTCGGGTTACTGCTCTCAGAAATGATGAACACTTTCTATGAACCTGCAGATAAACTCAGTAAAGATTCAAAGTTTTGGGCTTTGATATTTGTTGCCCTTGGTGTGGGATCCCTCTTAGTAATTCCAGCAAAGTTCTACTTTTTTGCTGTTGCTGGTGGTAAGTTGATAAGAAGGATCAGGTTAATGTGTTTTGAGAAAATAATCCATATGGAAGTAAGTTGGTTTGATGAATCTGAGCATTCAAGTGGAGTCCTTGGAGCCAGGCTATCTACAGATGCAGCTTCTGTCCGAGCTTTGGTCGGAGATGCACTTGTTTTGCTGGTTCAAAATATTGCTACTGCAATTATTAGCTTGGTCATTGCTTTGGAGGCATGCTGGCAACTTGCTCTTATAATTCTTGCTATGCTACCCTTATTAGTACTCAATGGATACGCGCAGTTCAAGGTCATCGAAGGTTTCAGCGCAGATGCCAAGAAATTGTATGAGGAAGCAAGTCAAGTGGCAAATGATGCAGTAGGTAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAGAGAAGGTCTTCTTTTCTCTCACTATTGCAGCATTTGGAATCTCCCAATTTAGCTCCTTGGCTCCTGACTCAAGTAAAGCAAAGAGTTCTGTTGGTTCTATATTTGCTATTATTGATGGGAAATCAAAAATAGACCGAAGTGATGACTCTGGATTGACATTGGAACACTTAGAGGGAGAAATTGAGTTTCACCATGTCAGTTTCAAGTATCCAACCAGACCTGATTTTCAAGTATTCAGAGATCTTTACCTTGAGCATTCGTCCAGGAAAGACGGTAGCTCTAGTTGGAGAAAGTTGAAGTGGGAAGTCGACTGTGATCTCATTTTTATGTTGTTTGATGACACAATCAGAGCCAACATTGCATATGGAAAGGGAGGGGATGCAACAGAGGCTGAAATTATTGCTGCAGCAGAACTTGCAAATGCTCACAAGTTCATTTCTAGTCTGCAGCAGGGGTATGATACAATAGTAGGAGAGAGAGGAGTTCAGTTATCCGGGGGACAGAAGCAGCGGGTGGCCATTGCGCGAGCCATAGTGAAGAATCCGAAGATATTGCTTCTGGATGAAGCAACCAGTGCCCTAGATGCAGAATCTGAGAAAGTGGTGCAAGAAGCATTGGATCAAATTATGGTGGAAAGAACCACAGTAATAGTGGCTCATAGGTTATCCACAGTTAAGAGTGCAGATTTGATTGCAGTAATTAAAAATGGAGTCATAGAAGAGAAGGGAAAGCATGAATCTTTGCTCTACAAAGGTGGTGCCTATGCTTCCTTAGCTGCATTGCACACAACAAGTTCTTCCATTAAAGAACTCAATTGA 3597 0.417 MTRETSLDGEIITNPVDESPEKVQGESDKHEDSKKTTKEEDVDTKTVPFYKLFSFADSLDYLLMLVGTVGAVANGIAMPLLIIFIGDTIDAFGGSADTKEVVHEVSKVCLKFIYLGVGAFLASFLQVTCWMITGERQAARIRGLYLKTILRQDISFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGQFIQGVSNFFGGFIVAFIEGWLLTLVMLSSIPPIVFSGALMSIVLAKATTQGQKAYSAAANIVDQTIGSIRTVASFTGEKQAIAKYDQFLIKAYRTSVQEGLASGLGFGSTYLLFYFTYGLAVWYGGKMVLEKGYTGGKVITVIFAVITGSLSLGQASPSLSAFAAGQTAASKMFETIKRKSDIDAYDTTGKQLHDIRGDIELREVCFSYPARPNEPIFNGFSLSIPSGTTTALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINIKELQLKWMRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRAAAELAYAAKFVDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDKIMINRTTVIVAHRLSTVRNADIVAVIQQGKTVEKGSHAELTKDPDGAYSQLIRLQETKESENINANDTDKPESIMNSERQSSQRLSSIKSVSRESSGLGRSSRHSFSLPYGVPPTNGLFETADAEHEAPCSADSPKPPDVPLYRLAYLNKPEIPVLLIGTLFAAANAAIFPAFGLLLSEMMNTFYEPADKLSKDSKFWALIFVALGVGSLLVIPAKFYFFAVAGGKLIRRIRLMCFEKIIHMEVSWFDESEHSSGVLGARLSTDAASVRALVGDALVLLVQNIATAIISLVIALEACWQLALIILAMLPLLVLNGYAQFKVIEGFSADAKKLYEEASQVANDAVGSIRTVASFCAEEKVFFSLTIAAFGISQFSSLAPDSSKAKSSVGSIFAIIDGKSKIDRSDDSGLTLEHLEGEIEFHHVSFKYPTRPDFQVFRDLYLEHSSRKDGSSSWRKLKWEVDCDLIFMLFDDTIRANIAYGKGGDATEAEIIAAAELANAHKFISSLQQGYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQEALDQIMVERTTVIVAHRLSTVKSADLIAVIKNGVIEEKGKHESLLYKGGAYASLAALHTTSSSIKELN 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0749 1198 ProSitePatterns ABC transporters family signature. 526 540 IPR017871 GO:0005524|GO:0016887
Acco04g0749 1198 FunFam ABC transporter B family member 9 51 383 - -
Acco04g0749 1198 SUPERFAMILY ABC transporter transmembrane region 45 367 IPR036640 GO:0005524|GO:0016020
Acco04g0749 1198 MobiDBLite consensus disorder prediction 1 39 - -
Acco04g0749 1198 Gene3D - 977 1011 IPR027417 -
Acco04g0749 1198 Gene3D - 377 626 IPR027417 -
Acco04g0749 1198 Gene3D - 1036 1189 IPR027417 -
Acco04g0749 1198 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 924 1187 IPR003439 GO:0005524
Acco04g0749 1198 Pfam ABC transporter 406 554 IPR003439 GO:0005524
Acco04g0749 1198 FunFam ABC transporter B family member 1 377 626 - -
Acco04g0749 1198 Pfam ABC transporter 1042 1118 IPR003439 GO:0005524
Acco04g0749 1198 SUPERFAMILY ABC transporter transmembrane region 714 965 IPR036640 GO:0005524|GO:0016020
Acco04g0749 1198 ProSitePatterns ABC transporters family signature. 1090 1104 IPR017871 GO:0005524|GO:0016887
Acco04g0749 1198 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 727 930 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco04g0749 1198 PANTHER ABC TRANSPORTER B FAMILY 27 628 IPR039421 -
Acco04g0749 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 976 1186 IPR027417 -
Acco04g0749 1198 SMART AAA_5 414 600 IPR003593 GO:0016887
Acco04g0749 1198 SMART AAA_5 1056 1171 IPR003593 GO:0016887
Acco04g0749 1198 Pfam ABC transporter transmembrane region 726 928 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco04g0749 1198 Pfam ABC transporter transmembrane region 64 338 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco04g0749 1198 CDD ABC_6TM_Pgp_ABCB1_D2_like 716 970 - -
Acco04g0749 1198 MobiDBLite consensus disorder prediction 637 673 - -
Acco04g0749 1198 Gene3D ABC transporter type 1, transmembrane domain 51 643 IPR036640 GO:0005524|GO:0016020
Acco04g0749 1198 MobiDBLite consensus disorder prediction 625 679 - -
Acco04g0749 1198 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 387 623 IPR003439 GO:0005524
Acco04g0749 1198 MobiDBLite consensus disorder prediction 21 39 - -
Acco04g0749 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 625 IPR027417 -
Acco04g0749 1198 FunFam ABC transporter B family member 1 706 931 - -
Acco04g0749 1198 FunFam ABC multidrug transporter, putative 1060 1189 - -
Acco04g0749 1198 CDD ABC_MTABC3_MDL1_MDL2 387 625 - -
Acco04g0749 1198 CDD ABC_6TM_Pgp_ABCB1_D1_like 64 360 - -
Acco04g0749 1198 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 65 352 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco04g0749 1198 Gene3D ABC transporter type 1, transmembrane domain 930 976 IPR036640 GO:0005524|GO:0016020
Acco04g0749 1198 Gene3D ABC transporter type 1, transmembrane domain 709 929 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0749 Acco-ChrAcco04 6247091 6254889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0749 43 1196 Calmodulin-binding Proteins AT2G36910 40.562 0.0 875