Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0743 ATGGAAGGACAGGTTTCATTGAAAGAGTTGCTGCAAGTTGAGAAAGAGCCATCACACACATGGGACAACAAAACCCAAGAAACCTCCATTGACAACACTACCTATATGCGTAATGAAGCAGTTTCCCTCAGTCTTAAATTTTCTGATACATGTGCAGATGGGGCTCAATTTTCTCAGTTTGGGCCTGAATATCTCAGGAAAAAACCACCAAAATCAAGAGGAGCCATTTACCCAAGTTTGCTCAGAATGAAGCTAGAGGAAGCAAAGAAAGAGAATCAGAATTTAAGGGCTATGCTAAAACAGAATACGGAACACTACACTTCTCTTCAGAATCACCTTCTTTTGGCTATGCAGAAGCAGCAGCAATCACCACCGCCTCCAAATTATCAAGATTTTCTGGATAGTTTGAATCAAAACTTGCTTAAGCAGAAAAGAGCAGATCATGTTATAGTGATGGAGAAAGCAGCCTTGGAAAGAGCTAAAAGAATGACAGATCAAGCATTTGAGCCATTTTGCAGGAAGGCTAGAGTTTCCATAAGGGCACGTTCAGATTTTTCTCTGATAGGTGATGGGTGTCAATGGAGAAAGTATGGACAAAAGACAGCTAAGAATAACCCTTGTCCTCGAGCTTATTATCGTTGCAGCATGGGAAATGAATGCCCAGTTCGTAAACAGATGCAAAGGTGTACTAAGGATGATACTATATTTATTACAAGTTATGAAGGAAGCCATAATCATCCACTCCCTGCAGCAGCCAAACCTATGGCAAGCATAACATCAGCAGCATTAAGCATGTTACTTTCAGGCTCGACCACTAGTCGTACACAAAATTATAGCACCACCCTCCTAAATTCAGGCTTATTCTCTTCATTATCTGCTTCTTCCTCTAGTGGCCTGGCTTCATCATGTCCTACAATAACACTGGACTTGACCATTCCCTCTAAAAACAACTCTTTGAACTTCCAAAGGCTTACCTCATCACTGAACCAGAGCCAATCATTCCCTTTCTCGTTGCATGGCTCTGCTCAAGAAACTGAGAGTCTGAACTTGTTTGCCAAGTCTCTGACCACAACGAAGACTGGGAAAAATCTTTGCTTGGAGGATTTAGTTGGTGCAACTATGGCCAAAGATCCTTCTTTTAAAGCAGCATTTGTTACAGCAACGTCTTCATTCACTGAAGAAACTCAGAAACTTAATAGCCACAATGAATTGAGTAAGAGTGGGCATGACCCTTCTTCTAAGATGCCCTCTTTGCTGAATCAGTCTTGCAACACTGGATTGATCCAGAGCCGACCCTTGTGGAGATGA 1308 0.419 MEGQVSLKELLQVEKEPSHTWDNKTQETSIDNTTYMRNEAVSLSLKFSDTCADGAQFSQFGPEYLRKKPPKSRGAIYPSLLRMKLEEAKKENQNLRAMLKQNTEHYTSLQNHLLLAMQKQQQSPPPPNYQDFLDSLNQNLLKQKRADHVIVMEKAALERAKRMTDQAFEPFCRKARVSIRARSDFSLIGDGCQWRKYGQKTAKNNPCPRAYYRCSMGNECPVRKQMQRCTKDDTIFITSYEGSHNHPLPAAAKPMASITSAALSMLLSGSTTSRTQNYSTTLLNSGLFSSLSASSSSGLASSCPTITLDLTIPSKNNSLNFQRLTSSLNQSQSFPFSLHGSAQETESLNLFAKSLTTTKTGKNLCLEDLVGATMAKDPSFKAAFVTATSSFTEETQKLNSHNELSKSGHDPSSKMPSLLNQSCNTGLIQSRPLWR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0743 435 Pfam WRKY DNA -binding domain 190 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g0743 435 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 79 402 IPR044810 GO:0003700
Acco04g0743 435 Coils Coil 81 105 - -
Acco04g0743 435 ProSiteProfiles WRKY domain profile. 183 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g0743 435 SUPERFAMILY WRKY DNA-binding domain 182 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco04g0743 435 Gene3D WRKY domain 173 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco04g0743 435 MobiDBLite consensus disorder prediction 396 421 - -
Acco04g0743 435 SMART WRKY_cls 188 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0743 Acco-ChrAcco04 6207060 6209398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0743 160 311 WRKY Transcription Factor Family AT4G04450 57.792 1.36e-52 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco04g0743 WRKY 8.3e-22 CL0274