Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0737 ATGAGAACAGGAGAACAAGTTGATGGGCAGCAGCAAACTCAGTCGTCGTCATCTTCTTCTTCTTCAATTGATAGCAGTAATTACCCTTTGGGGACTGCGAAACCTGCAACAGCTTCATCTTCTTCTTCTTCATGTCTCTCAAGTGTTTGTAGAAATGCTTCCAACAGCTCCAGAACTGATTTGATCACTGACCTCAGACTTGGTCTTACCATTTCTCCTTCTTCTTCTCAACCTGGCTTTCCCAATTCAAATCCCAGGTCAAGGAATCAAACTTCAGATTGGCCTCCAATAAAGTCAATACTGAGAAGCACTCTTGTGGAGAAACAAAATCAGTGGAGCCAAGGAAAGCCTTCCTTATTTGTCAAAGTGTACATGGAAGGCATACCCATTGGTAGAAAATTGAACCTTCTGGCTCACCATAGTTATGATGGACTTGTTAGAGCCCTAGGCCACATGTTCAGGACCACCATTCTCTGCCCTAATTCCCAACCACTTCATTCTGGAAATTTTCATGTGTTAACTTATGAAGATCAAGAAGGCGACTGGATGATGGTTGGAGATGTTCCATGGGAGATGTTCTTGACCAGTGTGAAAAGGCTGAAGATTACCAGAGCAGACAGATGCTAA 627 0.4322 MRTGEQVDGQQQTQSSSSSSSSIDSSNYPLGTAKPATASSSSSSCLSSVCRNASNSSRTDLITDLRLGLTISPSSSQPGFPNSNPRSRNQTSDWPPIKSILRSTLVEKQNQWSQGKPSLFVKVYMEGIPIGRKLNLLAHHSYDGLVRALGHMFRTTILCPNSQPLHSGNFHVLTYEDQEGDWMMVGDVPWEMFLTSVKRLKITRADRC 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0737 208 ProSiteProfiles PB1 domain profile. 118 207 IPR000270 GO:0005515
Acco04g0737 208 MobiDBLite consensus disorder prediction 72 95 - -
Acco04g0737 208 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 62 206 IPR003311 GO:0005634|GO:0006355
Acco04g0737 208 Pfam AUX/IAA family 47 204 IPR033389 -
Acco04g0737 208 SUPERFAMILY CAD & PB1 domains 116 202 - -
Acco04g0737 208 Gene3D - 113 208 - -
Acco04g0737 208 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0737 Acco-ChrAcco04 6145521 6146756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0737 121 208 B3 DNA Binding Superfamily AT2G46530 34.091 1.81e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Acco04g0737 AUX_IAA 1.8e-35 CL0072