Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0731 ATGGAGGGAAAGCTTGACTCCGACGATGGTGTGAAGCCCGTGACGGAGCAAGGAGCCGGAGGAGAGAAGGGCCTTGACGTGGTTCCAGAATCTTCTCCTCTAGCTGCGAATTCTGGCAAAAATGTTGATGGTGATGCTTGCGACGGAGAGGCTGTTGAAGAATCTGCTGGAGATTTATTGGGAGAGAAGCATCTCTCTGCAAACAGGTCAATGCCAGCATCTGGACCGAAGGCCTCTCAGCTCACCATCTTCTTCAACGGGAATGTTTTTGTCTATGATGGAATCCCTGCAGAGAAGGTGCATGAGATAATACGTATTGCTGCTTCTGCTGCTAAGTCTGCTGACATGAAGAATGGAATACAGTCCTCCTTTAATTCACCCATTCCCACAAGGCCATCTTCTCCACAGGGAACTCCTAATAATGTGGCTTCACCAAAACCTCTCTGTTTTCCTGGGCAGAAGAGTTCCATTTGTGGGTTGCAAGAATTTCCAATTGCACGCAGACAGTCACTGCAGCGCTTTCTTGAGAAGCGGCGAGATAGGTTGGGGAGCAGACCCCCATACGCTTCTCCTGCAAGAACTAAAGTGTCTGAGAATACTGAGAACAGCTGCAGTGCTGATAATGCACCTGATCTGGTTTCCTTCAAAAACTCACAGGAGGAGATTCAACCTGGCATCACTGCCTCTTAA 690 0.4884 MEGKLDSDDGVKPVTEQGAGGEKGLDVVPESSPLAANSGKNVDGDACDGEAVEESAGDLLGEKHLSANRSMPASGPKASQLTIFFNGNVFVYDGIPAEKVHEIIRIAASAAKSADMKNGIQSSFNSPIPTRPSSPQGTPNNVASPKPLCFPGQKSSICGLQEFPIARRQSLQRFLEKRRDRLGSRPPYASPARTKVSENTENSCSADNAPDLVSFKNSQEEIQPGITAS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0731 229 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 55 201 IPR040390 -
Acco04g0731 229 Pfam tify domain 76 108 IPR010399 -
Acco04g0731 229 MobiDBLite consensus disorder prediction 118 143 - -
Acco04g0731 229 MobiDBLite consensus disorder prediction 178 229 - -
Acco04g0731 229 MobiDBLite consensus disorder prediction 1 59 - -
Acco04g0731 229 Pfam Jas motif 164 188 IPR018467 -
Acco04g0731 229 MobiDBLite consensus disorder prediction 193 229 - -
Acco04g0731 229 ProSiteProfiles Tify domain profile. 74 109 IPR010399 -
Acco04g0731 229 MobiDBLite consensus disorder prediction 118 146 - -
Acco04g0731 229 SMART tify_2 74 109 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0731 Acco-ChrAcco04 6101626 6105008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0731 43 188 Tify Gene Family AT5G20900 45.098 1.10e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco04g0731 tify 1.2e-14 No_clan