Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0724 ATGTATCGATATGCCCTTTCTTCTTCAACCAAAATGGCGCCTGCAAAACACACCATCTCGTTTATTTTCTTGATTATTCTGATTCTGGGCTTGTTGATCCCTTTTAGTGATGCTGGTGGCAGTGATGTGAAGGGGTTAAAGTGCTTGAAAGTTTCATCTTCAGATTTCAGGGACTCTGTTCATGGAGTCATTGATGTCTTGCGACATGTTTCCTCCATCATGTCCAGGCTTCCCATCGGACGAGATTTTCGTCTCTCCAATGCCATTTCTGACTGCCTCGACTTGCTCGATTTGTCTTTTGATGATCTCCAGTTGTCTTCCTCTGCTACTGAGACTCCCTCAGGCCAGAAAAACGGTACCGGGAACTTGAGCTCTGATCTGAGAACATGGCTGAGTGCTGCACTAGCAAATCCACAGACATGCATGGAAGGGTTCGATGGTATCAATAGCATTGAAGATAATCTAGTATCAGATCTTATGAATCAAATGATTTCATCGATCCAGCAACTCTTAACCCAGGTTCTCCAAGAACAGGACGAGTTACCTACAAGCAAGGTACAGTTCCCTTCATGGATCAAACCAAGGGACCAGAAGCTCCTACAATCAAATAATACTAATGCAGATGTTATAGTAGCAGCAGATGGAACTGGGACATTCACTAGTGTATCAGATGCAGTGGAAGCAGCTCCTAATTATAGCATGAAACGTTTTGTGATATATGTAAAGAGGGGTCTGTACAAAGAGAATGTGGATATCAAGAAGAAGAAATGGAACATCATGATAATTGGTGAAGACATGGACGCCACTGTTATTTCCGGTAACCGGAATTTCATCGACGGTTGGACCACATACCGATCGGCTACTTTCGCCGTTAGTGGGAGAGGATTCATAGCACGAGACATTACATTCCAGAACACGGCAGGTCCACAAAAGCACCAAGCAGTGGCACTAAGATCAGACTCAGACCTCTCAGTCTTCTACCGCTGCGGCATCTACGGTTACCAAGACAGCCTCTACACACACACAATGCGACAATTCTACAGAGAATGTAAAATAAAAGGCACAGTGGATTTCATCTTCGGAGACGCCACAGCAGTGTTCCAAAAGTGCCTAATCCTCGCCAGAAAAGGCCTTCCAGGACAGAAAAACACAGTCACAGCACAAGGAAGAAAAGACCCACATGAACCAACCGGATTCTCCTTCCAGTTCTGCAAAATCTCTGCAGATTCAGACCTTGTTCCTTTTGTTGGATCCACTGAAACATACCTGGGAAGGCCCTGGCGGGCATTTTCTCGAACAGTTTATATGCAATCTTACATGAGCTACTTGGTGGACCCACGAGGATGGCTTGAGTGGGACGGAGATAAATCTTCAATGGACACACTTTATTATGCAGAGTATATGAATGGTGGTCCTGGGGCTGCTTTGGAGAAGCGAGTTAAATGGCCTGGGTTTCATGAGTTGAAGGATTCGACGCAGGCTTATCAATTCACTGTCGCTGATTTTATTCAAGGTGATTTATGGCTGCCTCACACTGGTGTGATGTACACTTCTGGTTTAGGCGTTTAA 1569 0.4493 MYRYALSSSTKMAPAKHTISFIFLIILILGLLIPFSDAGGSDVKGLKCLKVSSSDFRDSVHGVIDVLRHVSSIMSRLPIGRDFRLSNAISDCLDLLDLSFDDLQLSSSATETPSGQKNGTGNLSSDLRTWLSAALANPQTCMEGFDGINSIEDNLVSDLMNQMISSIQQLLTQVLQEQDELPTSKVQFPSWIKPRDQKLLQSNNTNADVIVAADGTGTFTSVSDAVEAAPNYSMKRFVIYVKRGLYKENVDIKKKKWNIMIIGEDMDATVISGNRNFIDGWTTYRSATFAVSGRGFIARDITFQNTAGPQKHQAVALRSDSDLSVFYRCGIYGYQDSLYTHTMRQFYRECKIKGTVDFIFGDATAVFQKCLILARKGLPGQKNTVTAQGRKDPHEPTGFSFQFCKISADSDLVPFVGSTETYLGRPWRAFSRTVYMQSYMSYLVDPRGWLEWDGDKSSMDTLYYAEYMNGGPGAALEKRVKWPGFHELKDSTQAYQFTVADFIQGDLWLPHTGVMYTSGLGV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0724 522 PANTHER PECTINESTERASE 67 510 - -
Acco04g0724 522 SMART PMEI_2 38 170 IPR006501 GO:0004857
Acco04g0724 522 FunFam Pectinesterase 202 520 - -
Acco04g0724 522 Pfam Pectinesterase 208 506 IPR000070 GO:0030599|GO:0042545
Acco04g0724 522 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 161 IPR035513 -
Acco04g0724 522 SUPERFAMILY Pectin lyase-like 206 519 IPR011050 -
Acco04g0724 522 ProSitePatterns Pectinesterase signature 2. 352 361 IPR033131 -
Acco04g0724 522 Pfam Plant invertase/pectin methylesterase inhibitor 67 170 IPR006501 GO:0004857
Acco04g0724 522 Gene3D - 202 520 IPR012334 -
Acco04g0724 522 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 176 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0724 Acco-ChrAcco04 6008425 6013801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0724 20 520 Carbohydrate Esterase AT3G43270 56.178 0.0 618