Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0723 ATGGCTTCCTCGACTCTCAAACCCTTCCTCCTTCTCTTCCCAATCTTCCTTTCACAAACTTTCGCTTCTCCCACAACAACACTTCATCCAAATCTCACCTCCATATGGTCTTTCTGCAGAATCAGGCCATACCCAGAAGCTTGCTTCAATTCTTTAAAGCTCGGCATTTCCATCAACATAAGCCCAAATATCCTCACCTACCTCCTTCAGACTCTGCAAACCGCCATCTCCGAAGCCACCCACCTCTCCGATCTCTTCCAAAATGAAGGCGGCGGCGGTTCTTCAAACCTCGTCGAGAAGCAGAGAGGTTCAATTCAAGACTGTAGAGAGCTCCATCTCTCAACATTGTTTTCCCTTAAAAGATCACTCTCTGGTGTTCGTGATTCTCCCACTTCTTCCAGAAAGCTCGCCAATGCCAGAGCCTACCTCAGCGCCGCCATGACCAACAAGAACACTTGCTTGGAAGGTCTCGACTCTGCTACGGGCTCCCTCAAGCCTCTTCTCGTGGACTCCACCATCGAAACTTACAAACACGTCAGCAACTCACTCTCCATGCTCCCCAAACCAGGAGGTTCCAGAGGCCATAAGAACAGGCGTCGACGTTTGCTGGGAGCTCCGGCGTGGCTGGAGAAGAGAGACCGTTGGATCTTGGACGGGGAAGGATACGATCCCGATAAGATGCTTGTGGTGGCGGCGGATGGAAGTGGGAACTTCAGCTCCATTACTGAAGCAGTGAACTTTGCTCCCAATAATAGCTTGTACAGGACAGTGATCTATGTGAAAGAAGGGGTTTATGAGGAAAATGTGGAGATCCCAAGTTACAAAACCAACGTTGTTCTACTAGGAGATGGAAGCGATGTCACTCTCATTACTGGTGACAGAAGCGTGGGCGGTGGCTGGACCACCTTCAGATCTGCAACTCTAGCTGTTTCCGGTGATGGGTTTCTGGCACGAGACATAGCGATAGAGAACAGAGCAGGGCCGGAGAAGCACCAAGCAGTAGCGTTGAGAGTAAACGCAGACTTAACGGCGCTATACAGATGCGCCGTTTATGGCTACCAAGACACTCTCTACGTCCATTCCTTCCGTCAGTTCTACAGAGAATGCGACATCTACGGCACCGTGGACTTCATCTTCGGGAACGCCGCCGTCGTTTTCCAAGACTGCGACGTCGTTTCGAGGAAGCCAATGCCTCACCAGTTCACCGTCATCACTGCTCAGGCCCGAGAATCACCGGACGAGGATACCGGAATCTCGTTCCAGAATTGCTCCGTCATAGCCACCCGAGATCTCGATAATAGCTCTGGCAGCTTCAAGAGCTACCTCGGACGTCCATGGAGGCCATATTCTCGGACTGTGTACCTTGAATCTTACATTGATGACTTCGTGGACCCAGAGGGGTGGAAGGATTGGTCTGATTCTAATGGAGATGATTTGGAGACTTTGTACTATGGAGAGTACCAGAATTATGGTCCGGGTTCGGGTACGGGTGGTCGGGTGAATTGGGCCGGGTACCATATGATGGGGTATAAGGATGCATATAATTTTACGGTTTCTCAGTTCATTATGGGTGATGCTTGGCTTCAGTCCACTTCATTCCCTTATGATGCAGGCATTTGA 1620 0.5049 MASSTLKPFLLLFPIFLSQTFASPTTTLHPNLTSIWSFCRIRPYPEACFNSLKLGISINISPNILTYLLQTLQTAISEATHLSDLFQNEGGGGSSNLVEKQRGSIQDCRELHLSTLFSLKRSLSGVRDSPTSSRKLANARAYLSAAMTNKNTCLEGLDSATGSLKPLLVDSTIETYKHVSNSLSMLPKPGGSRGHKNRRRRLLGAPAWLEKRDRWILDGEGYDPDKMLVVAADGSGNFSSITEAVNFAPNNSLYRTVIYVKEGVYEENVEIPSYKTNVVLLGDGSDVTLITGDRSVGGGWTTFRSATLAVSGDGFLARDIAIENRAGPEKHQAVALRVNADLTALYRCAVYGYQDTLYVHSFRQFYRECDIYGTVDFIFGNAAVVFQDCDVVSRKPMPHQFTVITAQARESPDEDTGISFQNCSVIATRDLDNSSGSFKSYLGRPWRPYSRTVYLESYIDDFVDPEGWKDWSDSNGDDLETLYYGEYQNYGPGSGTGGRVNWAGYHMMGYKDAYNFTVSQFIMGDAWLQSTSFPYDAGI 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0723 539 ProSitePatterns Pectinesterase signature 2. 371 380 IPR033131 -
Acco04g0723 539 FunFam Pectinesterase 222 539 - -
Acco04g0723 539 SMART PMEI_2 30 185 IPR006501 GO:0004857
Acco04g0723 539 NCBIfam pectinesterase inhibitor domain 10 186 IPR006501 GO:0004857
Acco04g0723 539 Gene3D - 223 539 IPR012334 -
Acco04g0723 539 Pfam Plant invertase/pectin methylesterase inhibitor 35 185 IPR006501 GO:0004857
Acco04g0723 539 CDD PMEI-like_3 37 191 - -
Acco04g0723 539 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 188 IPR035513 -
Acco04g0723 539 SUPERFAMILY Pectin lyase-like 224 537 IPR011050 -
Acco04g0723 539 FunFam Pectinesterase 31 188 - -
Acco04g0723 539 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 186 IPR035513 -
Acco04g0723 539 Pfam Pectinesterase 228 525 IPR000070 GO:0030599|GO:0042545
Acco04g0723 539 PANTHER PECTINESTERASE 25 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0723 Acco-ChrAcco04 5997593 5999748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0723 27 539 Carbohydrate Esterase AT2G26440 67.113 0.0 706