Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0722 ATGGTTATGCGAGTCTCTCATCGGAAATTTGAAGCTGCATTTCCGACTCTTACGAGCAACAAGAGAATTACATATGGATTCTTTAGTTCGATAAAGATTGTTCAAGCAACATCAGGCATTGCAATTTCATTCCCCAAAGCAACTCTTTTTCCTCTGTTGGTCGCCATAGAGGATGAGGTGGATTGTGGCATTGAGGACTCAAACGAACAACCCGTGATGAGTTCTCTCCTGTCTCACTTCGATCTAATCACTGAGCAAAGGAAAAATGACAAGAAACAAAAAATCAAACGCAGAATCGCCATCGGCGCAGTTTGCACCATCGCCGTCATTGGTCTCATCGGAGCTGCCGCTTTCGTATTGGTCACCAAAAACAGTGAAGAAGACAAGGAATTCAATAACCACAACAAAAAATCCCCACCTTCCTCTTCCTCCTCAAAGAGTAACCCTGACAACCAGGTTTCTGCTGTTTCAGAGAAATTTGTGAAGACCATTTGCGGTTACACCGATTACCAGGAAAAATGCGAGACAAGTCTGAAGGAGGAAGTGAAAAATGATACAAAAATATCGCAACCCAAAGATGTGCTTAAAGTTGCTATCTCCGTCGCACAGGATGAGTTCAATAAGGCCATGAACAAATCCAGCAACTTCAACTTTGAAACCGACCAAGACAAAGGTGCTTTCGAGGATTGCAAGAAGCTTCTAGAAGCGGCGAAGAACGATCTAGGGAATTCATCTTCACATGTTGCGTCACTCGACATGGCCAAGCTAACGTCATCCTCCTCGGATTTGAACAGTTGGCTCAGTGCTGTTATTTCTTTCCAGGGAGCTTGTCTTGATGGGTTTTCCGAAGGGAAATTGAAGACGGAATTGGAGAGTGCGTTTAAGGATTCAACGGAGTATGTTAGCAATTCTCTAGCTATTTTATCGCAGCTAGGCTCTGTTTTTTCGTCGGCATTATTGAACGGCGGTGCTAGTCGTCACTTGCTGTCGTCGTCCGATGATAAGGGTCTTCCGGAGTGGATGAAAGATGAAGATCGGAGGATGTTGAAAGCAGCTGATGATAAACCTACACCTAACGTCACCGTAGCTAGCGATGGCAGTGGCGACTTCAAAACCATCTCCGAAGCTCTGAAAGCCATCCCACAAAAATACGATGGAAGGTACGTGGTTTATGTTAAAGCAGGAACATATGATGAAACTGTAGTAATAGAATCGAGAATGGTAAACCTTACCCTTTATGGCGATGGATCACAAAAAAGCATTATCACCGGCAACAAGAATTACGTTGATGGAGTAAGGACTTACCATACTGCATCATTTGCCGTAGAAGCAGATGGGTTTTTAGGGAAGGCCATGGGATTCAGAAACACGGCAGGCCCAGAGAAACACCAAGCCGTAGCCGCAAGAATCCAAGGAGATCGTGCGGTGTTCGTGAACTGTCGTTTTGAAGGGTTCCAAGACACGCTTTACGCCCTAGCGCACAGGCAATTCTACCGGAGCTGCGTGATCTCCGGCACAGTGGACTTCATCTTCGGCGACGCGGCCGCAGTATTCCAGAACTGCATAATAAACGTAAGGAAACCCTTGGACAACCAGCAGACCATAGTGACAGCCCAAGGCAGAATGGATCCACGACAACAAACCGCTATTGTTCTGCAAAACTGTCAGATCAAGGCAGACACCTCACTCGCCTCCGTGAAAGACAAGTTCAAGAACTACCTCGGGCGGCCATGGAAGGAGCACTCGAGAACAATCATCATGGAGTCACAGATCGATGGCATCATCGACCCTGAAGGGTGGATGCAATGGGAAGGCGAATTTGCACTCAAAACATTGTTCTATGCTGAGTACAACAACACTGGACCAGGTGCCAACACTGATAATAGGGTGAAGTGGCCTGGCTACAAGAAAATCACTAGGGACGAGGCAAGCAGCTTCACCGTCGAAACTTTCTTGGCCGGTAATTGGATCTCCGGGATCAACGTGCCGGTTCAGCGAGGCTTATATCACTGA 2013 0.466 MVMRVSHRKFEAAFPTLTSNKRITYGFFSSIKIVQATSGIAISFPKATLFPLLVAIEDEVDCGIEDSNEQPVMSSLLSHFDLITEQRKNDKKQKIKRRIAIGAVCTIAVIGLIGAAAFVLVTKNSEEDKEFNNHNKKSPPSSSSSKSNPDNQVSAVSEKFVKTICGYTDYQEKCETSLKEEVKNDTKISQPKDVLKVAISVAQDEFNKAMNKSSNFNFETDQDKGAFEDCKKLLEAAKNDLGNSSSHVASLDMAKLTSSSSDLNSWLSAVISFQGACLDGFSEGKLKTELESAFKDSTEYVSNSLAILSQLGSVFSSALLNGGASRHLLSSSDDKGLPEWMKDEDRRMLKAADDKPTPNVTVASDGSGDFKTISEALKAIPQKYDGRYVVYVKAGTYDETVVIESRMVNLTLYGDGSQKSIITGNKNYVDGVRTYHTASFAVEADGFLGKAMGFRNTAGPEKHQAVAARIQGDRAVFVNCRFEGFQDTLYALAHRQFYRSCVISGTVDFIFGDAAAVFQNCIINVRKPLDNQQTIVTAQGRMDPRQQTAIVLQNCQIKADTSLASVKDKFKNYLGRPWKEHSRTIIMESQIDGIIDPEGWMQWEGEFALKTLFYAEYNNTGPGANTDNRVKWPGYKKITRDEASSFTVETFLAGNWISGINVPVQRGLYH 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0722 670 FunFam Pectinesterase 353 668 - -
Acco04g0722 670 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 159 311 IPR035513 -
Acco04g0722 670 MobiDBLite consensus disorder prediction 129 152 - -
Acco04g0722 670 PANTHER PECTINESTERASE 121 658 - -
Acco04g0722 670 ProSitePatterns Pectinesterase signature 2. 503 512 IPR033131 -
Acco04g0722 670 Pfam Pectinesterase 359 655 IPR000070 GO:0030599|GO:0042545
Acco04g0722 670 Pfam Plant invertase/pectin methylesterase inhibitor 159 307 IPR006501 GO:0004857
Acco04g0722 670 Gene3D - 357 670 IPR012334 -
Acco04g0722 670 NCBIfam pectinesterase inhibitor domain 147 311 IPR006501 GO:0004857
Acco04g0722 670 SMART PMEI_2 156 307 IPR006501 GO:0004857
Acco04g0722 670 MobiDBLite consensus disorder prediction 136 152 - -
Acco04g0722 670 CDD PMEI-like_3 163 313 - -
Acco04g0722 670 FunFam Pectinesterase 157 312 - -
Acco04g0722 670 Gene3D Invertase/pectin methylesterase inhibitor family protein 156 313 IPR035513 -
Acco04g0722 670 SUPERFAMILY Pectin lyase-like 357 659 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0722 Acco-ChrAcco04 5991915 5995464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0722 80 669 Carbohydrate Esterase AT2G26450 46.580 0.0 571