Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0719 ATGATGTTCAATGCTCAAGGTCCTTCAAAAAAATCTAGTCTCCTTGCCATCCTCAGTGGAAATTCATCTGAAAATAAGCAAAAACTAAAACAGGATGATTTTAAGGATCAATCTCCATACCCCATTCCGGAGCTAACTTCATCCGGGCTTCTTGAGGTTAATGTTTTGATCAAACCAACTGCTGATGAACTTCATCGAGTTTTTGAAGCATTGGAGCCAAATTTTGTTTACTTGCAAGGCGAGCAGCTTGAAGATAGTGAACAAATTGGGTCCCTAGTATGGGAAGATGTTGATCTGTCTACCCCAGAAGCCTTATGTGGATTATTTTCCTCCAAATTACCTAATACCGTTTATTTGGAAACTCCTGAAGGAGAAAGTTTGGCAGAGGCTCTCCATTCTAAGGGAATTCCTTACACCATATATTGGAATAGCGAATTTTCAAAGTATGCTGCTTCACATTTTCGTGAAGCTTTTTTCTCAGTGGCACAAAGTACCTTCAGCCACACATGGGATGCTTTCCAGCTTGCTCTTGCTTCTTTCAGATTATACTGTGTACAAAACAATTTCTCACCTTCAAACAAAATGAAGAGAAGAAGCAAGCTTGAGCCACAAATGTTTGGTGACCCTCCAAACATTGATACTGCTCCATTTGAAGCAGGCATGAATGAGGAAGAAAACTCGCCTGAGACTATTTCTGCTCTGAAGATTTATGATGATGATGTGAACATGAGATTTCTTGTGTGTGGAGTTGCTTGCATGCTGGATACTTGCTTATTGGAATCATTGGAGGACGGACTTAATGCTATCCTGTGTACAGAAATACGAGGATGTAAACTTCACAACCGGACAAGTGCTCCACCACCTCCTCTTCAGGCAGGGACATTCTCACGTGGTGTGGTGACTATGCGTTGTGATATAGCCACATGTAGTTCTGCTCATATATCACTCTTGGTGTCTGGTAGTGCAGATACTTGCTTTAATGATCAGCTTTTGGAGACTTATATAAAAAAGGAGCTGATTGAGAAGAGTCAGCTAGTTCAGGCATCTACCAATTGTGAACAAAGCAACTTACCTTCCTCTGAGCCTCGAAGGTCAACTTCAATAGCTTGTGGGGCTAGTGTATTTGAAGTTTGCATGCGGGTTCCTACATGGGCTTCATTGGTTCTGAGACAGCTTGCACCAGAAGTGTCATACCGTAGCCTAGTTATGCTGGGAGTAGCCAGTATTCAAGGATTGCCTATTGCATCATTTAAGAAAGTTGATGCTGAACGTCTCCTTTACTTCTGTTCAAGGCAGTCAGAAAAAAATTGCCTTAATGACCCCATTTCTTTTGGGCATCCTAGTTGGTTGACACCTCCAGCACCTACTCGAAAACGATCAGAGCCATTCTCGGGACTAAAGTCTGTCAATTCTAGTAGCCTTCAAGTCAGTGGTAGTGGTAACAATAGACATAAATTGAACATCGCTGCAATGAGGCCAATCCCTCACTCAAATTGTCAGAAGATTCGACCTTTCTCTGGATTGTCTGAAGGGGAAAGGCTTGATGGAGAACGTGCAAAATCAAATTTGCCAATGGCTCCAATAAAGCATAATGGTGTAGGCTCTAATTCAGTCACAAATAGGAAATCTTCGTCAACTTCCTTTCAGGCTCAACAGATTGTTACTTTAAACCCGCTACCCATGAAGAAGCATGGTTGTGACAGAGCTCCCATACGGTCTTGTTCAGAGGAGGAATTCTTGAAGGATGTAATGCAGTTTCTTATCCTTCGTGGGCATTCTCGGCTAATTCCACAAGGCGGTCTTTCTGAATTCCCTGAAGCCGTTCTGAATGCTAAACGCCTTGATCTTTTTAACTTGTACAGAGAGGTGGTATCTAGAGGAGGGTTTAATGTTGGGAACGGAATCAACTGGAAAGGACAAGTTTTCTCAAAGATGCGGAATCACACTTTGACGAATAGAATGACAGGTGTTGGCAATACACTTAAAAGACACTATGAAACTTATCTTCTAGAGTATGAACTGGCTCATGATGACATAGATGGAGAGTGCTGCTTGTTGTGCCGCAGTAGCGCAGCTGGCGATTGGGTGAATTGTGGGATATGCGGTGAGTGGGCCCACTTCGGCTGTGATAGGCGTCAAGGACTTGGTGCATTTAAGGACTATGCTAAAACGGATGGGCTAGAGTACATTTGCCCGCATTGCAGCATCTCAAATTTCAGAAAGAAATCTCAGAAAACTTCAAACGGATATTAA 2253 0.4257 MMFNAQGPSKKSSLLAILSGNSSENKQKLKQDDFKDQSPYPIPELTSSGLLEVNVLIKPTADELHRVFEALEPNFVYLQGEQLEDSEQIGSLVWEDVDLSTPEALCGLFSSKLPNTVYLETPEGESLAEALHSKGIPYTIYWNSEFSKYAASHFREAFFSVAQSTFSHTWDAFQLALASFRLYCVQNNFSPSNKMKRRSKLEPQMFGDPPNIDTAPFEAGMNEEENSPETISALKIYDDDVNMRFLVCGVACMLDTCLLESLEDGLNAILCTEIRGCKLHNRTSAPPPPLQAGTFSRGVVTMRCDIATCSSAHISLLVSGSADTCFNDQLLETYIKKELIEKSQLVQASTNCEQSNLPSSEPRRSTSIACGASVFEVCMRVPTWASLVLRQLAPEVSYRSLVMLGVASIQGLPIASFKKVDAERLLYFCSRQSEKNCLNDPISFGHPSWLTPPAPTRKRSEPFSGLKSVNSSSLQVSGSGNNRHKLNIAAMRPIPHSNCQKIRPFSGLSEGERLDGERAKSNLPMAPIKHNGVGSNSVTNRKSSSTSFQAQQIVTLNPLPMKKHGCDRAPIRSCSEEEFLKDVMQFLILRGHSRLIPQGGLSEFPEAVLNAKRLDLFNLYREVVSRGGFNVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYELAHDDIDGECCLLCRSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSISNFRKKSQKTSNGY 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0719 750 MobiDBLite consensus disorder prediction 449 481 - -
Acco04g0719 750 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 7 750 IPR042293 -
Acco04g0719 750 SUPERFAMILY ARID-like 574 687 IPR036431 GO:0003677
Acco04g0719 750 MobiDBLite consensus disorder prediction 463 481 - -
Acco04g0719 750 Pfam ARID/BRIGHT DNA binding domain 576 673 IPR001606 GO:0003677
Acco04g0719 750 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 679 735 IPR013083 -
Acco04g0719 750 SMART ARID_2 570 673 - -
Acco04g0719 750 SUPERFAMILY FYVE/PHD zinc finger 669 737 IPR011011 -
Acco04g0719 750 CDD PHD_ARID4_like 683 734 - -
Acco04g0719 750 CDD ARID 575 673 - -
Acco04g0719 750 MobiDBLite consensus disorder prediction 523 547 - -
Acco04g0719 750 MobiDBLite consensus disorder prediction 532 547 - -
Acco04g0719 750 ProSiteProfiles ARID domain profile. 573 677 IPR001606 GO:0003677
Acco04g0719 750 Gene3D - 566 678 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0719 Acco-ChrAcco04 5953174 5959741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0719 2 749 ARID Transcription Factor Family AT3G43240 62.850 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Acco04g0719 ARID 4.7e-14 CL0123