Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0701 ATGAAGCTCAAGTTCATAGCTCTGCAATTTTTTCTATTTTTGGTGGCTCTTCTTGGTTTCAATGCACGGGCCTCCAATGTGACAGTAAATGAGACGACTTGTGGTTCCTTAAACGGTCCTCAGAGTAGAGAAAGTGCAGATCCATGCCCAGCTGGTTGGGTTGTTGGCCCTAATAAAGCCAGGTGCTTTTACCATGTGGGAAAGCCTCAATCTTGGAATGACTCAGAGACCCATTGTAATAAATGTGGCGGACATTTAGCTTCTTTGATATCTCTTCCAGAACTACACTTTGCTCAGAATCTATGTGGTGACAATTGCTGGGTTGGAGGAAGAAGAATTAACTCCACAGCTGGTTATGAGTGGATGTGGTCTGACAAATCTTTGTGGAATGAGTCAATGTTTCCTTTGTTGCTTGATCAAACTAATTGTACTGGATTATTCTGCAACACGAAAGGTGCAGTCAATACATGTACTATAATGACTAATCATTCAGATTCTCTTGTGAGCGATACATGCGACAAACTGAATTCTTCAGTGTGTGTACTTGATATAGATAAAAAATGTTACCACATGCGCTGCCACAGGGAATATCTGATCATCCTTGCAGGGGTGAGTGCATTGATCCTCTGCACAATGTCAGCTGTTGTGATATGGTTTCTTGCACATAAACGGAGCAAGAAGAGTAAACGATCTAGAAAAGTATCGAATCCAGCTGCTTCTCAGTCAGTTCCTCCCTCTTGGAAAGTTTTTACCAAAGAGGAATTAAGATCAATTACAAAGAACTTTAGTGAAGGTAACCGCCTTGTTGGGGATGCCAAGAGTGGTGGTACATATAGTGCAGCCCTACCTGATGGCTCAAAGGTTGCAGTCAAGAGATTGAAGAAGTCAACTTTTCAGAGGAAAAAGGAGTTCTATTCTGAAATTGGTAGGGTTGCAAGACTTCGTCATCCTAATTTAGTGGCTGTGAAGGGATGCTGCTATGATCACGGTGATCGCTACATTGTTTATGAGTTTGTAGTTAATGGCCCCTTAGACAAATGGCTACATCATATACCAAGGGGAGGTCGCAGCTTAGATTGGACTATGAGAATGAAAATTGCCACAACACTTGCTCAAGGAATTGCTTTTTTGCATGACAAGGTGAAGCCACATGTTGTTCATCGGGATATTCGGGCCAGTAATGTGCTGCTAGATGAGGAGTTTGGAGCGCACCTTATGGGATGTGGTCTATCCAAGTTCGTGCCATATGAAGCGATGCATGAGAGGACTGTGATGGCAGGTGGAACTTATGGATATCTTGCTCCAGAGTATGTGTATAGAAATGAGCTCACAACGAAGAGTGATGTTTACAGTTTCGGTGTGCTGTTACTTGAGATAGTAAGCGGGCGTAGACCTGCACAGGCAGTGGATTCAGTGGGTTGGCAGAGCATATTCGAGTGGGCAACACCACTAGTGCAAGCTCATCGCTATCCTGAACTCCTGGATCCTCATATAACTTCGTCGTCATCGTCATCTACTATCCCTGAGGCTAGCACAATCCAAAAGGTGGTTGACCTTGTCTATTCGTGCACGCAGCATGTCCCATCGATGCGTCCTAGAATGTCCCATGTTGTCCATCAGCTCCAACAATTGGCTAACCCACCAACCAAGTGA 1653 0.4404 MKLKFIALQFFLFLVALLGFNARASNVTVNETTCGSLNGPQSRESADPCPAGWVVGPNKARCFYHVGKPQSWNDSETHCNKCGGHLASLISLPELHFAQNLCGDNCWVGGRRINSTAGYEWMWSDKSLWNESMFPLLLDQTNCTGLFCNTKGAVNTCTIMTNHSDSLVSDTCDKLNSSVCVLDIDKKCYHMRCHREYLIILAGVSALILCTMSAVVIWFLAHKRSKKSKRSRKVSNPAASQSVPPSWKVFTKEELRSITKNFSEGNRLVGDAKSGGTYSAALPDGSKVAVKRLKKSTFQRKKEFYSEIGRVARLRHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDKWLHHIPRGGRSLDWTMRMKIATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGCGLSKFVPYEAMHERTVMAGGTYGYLAPEYVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYPELLDPHITSSSSSSTIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQLANPPTK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0701 550 Gene3D Phosphorylase Kinase; domain 1 221 338 - -
Acco04g0701 550 Gene3D - 32 183 IPR016186 -
Acco04g0701 550 Pfam Lectin C-type domain 69 181 IPR001304 -
Acco04g0701 550 SMART CLECT_2 49 181 IPR001304 -
Acco04g0701 550 ProSitePatterns Tyrosine protein kinases specific active-site signature. 385 397 IPR008266 GO:0004672|GO:0006468
Acco04g0701 550 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 339 550 - -
Acco04g0701 550 Gene3D Transferase(Phosphotransferase) domain 1 339 546 - -
Acco04g0701 550 SUPERFAMILY Protein kinase-like (PK-like) 236 542 IPR011009 -
Acco04g0701 550 ProSiteProfiles C-type lectin domain profile. 58 181 IPR001304 -
Acco04g0701 550 FunFam C-type lectin receptor-like tyrosine-protein kinase 240 338 - -
Acco04g0701 550 SMART tyrkin_6 262 541 IPR020635 GO:0004713|GO:0006468
Acco04g0701 550 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 172 544 - -
Acco04g0701 550 CDD CLECT 61 180 - -
Acco04g0701 550 ProSiteProfiles Protein kinase domain profile. 263 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0701 550 Pfam Protein tyrosine and serine/threonine kinase 284 541 IPR001245 GO:0004672|GO:0006468
Acco04g0701 550 SUPERFAMILY C-type lectin-like 34 183 IPR016187 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0701 Acco-ChrAcco04 5746410 5751615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0701 79 547 Receptor kinase-like Gene Family AT1G52310 69.182 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Acco04g0701 PK_Tyr_Ser-Thr 1.9e-40 CL0016