Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0697 ATGTTATTGGACAACTCTGTAGCAGAAAGTAAAGGAGATTCTTCATCTTGGCGGTCGTTTTTAGAGAATTTTCTATCTGTGAAGAGTTTGGTCGTCATGAAGCCTTTACCGAATGGCTACTTGCCTAATTCTGGCGAAGGAGAAAGAAAAACAATCAACTCAGAGTTATGGCATGCATGTGCCGGACCCCTGGTTTCCTTACCTCCTGTTGGAAGTCTTGTTGTTTATTTTCCTCAAGGACACAGTGAGCAAGTTGCAGCATCCATGCAAAAGGAGGCTGATTTTATACCCAGTTATCCTAACCTTCCATCCAAGTTAATTTGCATGCTTCACAATGTTGCACTACATGCCGATCCAGAAACTGATGAGGTCTATGCACAGATGACCCTTCAACCTGTAAACAAATATGACAAGGAGGCAATACTGGCATCAGACATGGGTCTGAAGCAAAGCCGACAGCCTGCTGAATTCTTCTGCAAAACTCTCACAGCTAGTGACACAAGCACTCATGGGGGATTTTCTGTACCTCGCAGAGCAGCAGAGAAAATATTTCCACCTCTGGATTTTTCAATGCAACCTCCTGCTCAGGAGATTATTGCCAAGGATTTGCATGACAATACATGGACATTCAGACATATTTATCGCGGACAACCAAAGAGACATCTGCTGACTACAGGTTGGAGTGTCTTTGTCAGCACAAAAAGACTATTTGCTGGAGATTCTGTTCTTTTCATCAGAGATGGAAAACAGCAGCTTCTTGTGGGTACAAGGCGTGCTAATAGATTGCAGCCCGCTCTATCTTCATCAGTCATATCCAGTGACAGCATGCATATAGGCATTCTTGCTGCTGCAGCTCATGCCGCTGCAAATAACAGCCCATTTACCATATTTTACAATCCGAGAGCTAGCCCTGCTGAATTTGTAATTCCATTGGCCAAGTATAATAAAGCCATGTACACCCAAGCTTCCCTTGGAATGAGGTTTAGAATGATGTTTGAGACTGAGGAGTCAGGAGTTCGTCGATACATGGGTACGATTACTGGGATCAGTGACTTGGATCCTATGCGGTGGAAAAATTCACAGTGGCGCAATCTTCAGGTCGGATGGGATGAATCAACAGCTGGTGAGCGCCCTGGCAGGGTATCAATTTGGGACATCGAACCGGTAGTTACTCCTTTCTATATTTGCCCGCCTCCTTTCTTCAGGCCTAGGTTCCCCAAGCAACCAGGAATGCCAGATGATGAGTTTGACATGGAAAATGCATTCAAGAGAGCTATGCCCTGGCTTGGAGATGACTTTGGCATGAAAGATGCCTCAAGTTCAATGTTTCCTGGTTTGAGTTTAGTTCAGTGGATGAGCATGCAGCAGAATAACCAGTTATCTGCTGCACAATCAGGAATGGTCCCATCTGTGCTTTCATCCAATTCCCTTAATAATAACCTCAGCACCGATGATCCATCCAAATTATTGAGTTTTCAAAACCCTGTCCTCTCTGCATCAAATCTTCAATTTAACAGGCCAAATTTACCGAACCAGGTCAACCAATTGCAACAAGCCCCAACATCATGGCCTCAGCAGCAGCAGCAGCAGCAGCAACAGTCTCAGCAGCAGCAGATGCAATCCTTGTTGCAAGCACCTGTAAACCAGCTCCGGCAGCAGAGGCAGCAGCCACAGCCACAGCAGCAGCAGCAGCTTCCCGAGCCACAAAATCTGACACAGCAGCAGCAGCAGCAGCCCCAATTGCAGCAACAGCGAGCACAACAACCACAGCAGCAGCAGCCATGCCAACAGGCCATTATAAACAACGGGGTGATTGGGTCTAGCCAGATTCCAAATCAGAATGTGCAACAATCAATAGCCTACTCTCAGCTTCAGCAGCAGCAGTTACTCTCAGCTAGCATGCCACTTCAGCAAAATATTCAATCAGCCAGCAAGAATGCATTCCCTCTCACGAACTTACCACAAGATTCACAGTTTCAGCCACAGATAGACCAGCAAGCCACTCTCTTGCAGAGGCAGCAGCAAAATCAATTGCAGATATTGCAACAAAGCTTGTCACAGAGGGCCCCTCAACAACCACAAGTGGCTCAATTGCCTCAACAAAACCTGTCAGAACAGCACTTGCAGTTGCAGTTGCTGCAAAAATTGCAGCAGCAGCAGCAATTTCTTTCTCCAGCCAGTTCACTTTTGCAGCCTCAGGTGCTACAGCAACAGCAAGCACACCTACAAAACCAACAACTACCACAACCGCCTCTATCTCAGCATCAGCCTCAGCCTCAGCAGCTCAGCAACAATGCATTATCTGCAGAGAAGTTTCTGGGCAGCAACAGCTTTTCTTCTTCACCTCTTATACAACCACAACAACTTCCTCTGAACCCAGCCCAGAATACACCAAAACCACTTACAACTACCAGAGCTCCTTCAAATCTTACAGACGGAGATGCCCCATCATGTTCAACCTCACCATCAACTAATAACTGCCAGGTATCTCCACCAAACCTTCTGAAGAGAAATCAACAAGTGCCAGCAACATTAGGGGGGAGCTTAGTAGTTGAGCCCACTAATAATCTGGTACAGGAGCTTCAGGGCAAGTCTGATATCCAGATTAAACATGAGTTGCCAGGTGTAAAAGGGCCTGACCAGCTAAAGTACAAAGGGACAATAACTGATCAATTGGAAGCCTCCTCTTCTGGAACATCTTACTGCCTTGATCCTTGCAGTGTCCAGCCCAACTTCCCCCTTCCCAATTTCTGCATGGATGGGGATGTCCAATCGCATCCTAGGAATAGTCTTCCATTTGCCTCTAATCTTGATGGGTTGACGCCTGATACTTTGCTCTCGAGAGGGTATGACTCACAAAAAGATCTTCAAAATCTGCTCTCTAACTATGGTGGTGCTCCAAGAGATATAGAAACTGAGCTGTCAACTGCTGCTATCAGCTCACAGTCATTTGGTGTGCCAAGCATGCCCTTTAAGCCTGGCTGCTCAAGTGATGTTGCCATCAATGAGACTGGGGTTTTGAATAATAGCTTGTGGGCTAACCAGAGTCAACGAATGCGAACATATACTAAGGTTCAAAAACGTGGCTCTGTTGGAAGGTGCATTGATGTCACTCGTTACAAGGGATATGATGAACTCAGACATGACTTGGCTCGTATGTTTGGGATTGAAGGGCAACTGGAAGATCCTCAAAGGACAGACTGGAAACTAGTATATGTAGATAATGAAAATGACATTCTTCTTGTTGGGGATGACCCTTGGGAAGAATTTGTAAGCTGTGTTCAGAGCATAAAGATACTGTCATCTGCTGAAGTGCAGCAGATGAGTTTAGACGGGGATTTGGGTAATGTACCAATATCCAATCAAGCTTGTAGTGGGACAGATAGTGGTAATGCATGGAGGGGACAATACGACGATAACTCGGCCGCCTCATTTAATCGATAA 3444 0.4591 MLLDNSVAESKGDSSSWRSFLENFLSVKSLVVMKPLPNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIIAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKQQLLVGTRRANRLQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPAEFVIPLAKYNKAMYTQASLGMRFRMMFETEESGVRRYMGTITGISDLDPMRWKNSQWRNLQVGWDESTAGERPGRVSIWDIEPVVTPFYICPPPFFRPRFPKQPGMPDDEFDMENAFKRAMPWLGDDFGMKDASSSMFPGLSLVQWMSMQQNNQLSAAQSGMVPSVLSSNSLNNNLSTDDPSKLLSFQNPVLSASNLQFNRPNLPNQVNQLQQAPTSWPQQQQQQQQQSQQQQMQSLLQAPVNQLRQQRQQPQPQQQQQLPEPQNLTQQQQQQPQLQQQRAQQPQQQQPCQQAIINNGVIGSSQIPNQNVQQSIAYSQLQQQQLLSASMPLQQNIQSASKNAFPLTNLPQDSQFQPQIDQQATLLQRQQQNQLQILQQSLSQRAPQQPQVAQLPQQNLSEQHLQLQLLQKLQQQQQFLSPASSLLQPQVLQQQQAHLQNQQLPQPPLSQHQPQPQQLSNNALSAEKFLGSNSFSSSPLIQPQQLPLNPAQNTPKPLTTTRAPSNLTDGDAPSCSTSPSTNNCQVSPPNLLKRNQQVPATLGGSLVVEPTNNLVQELQGKSDIQIKHELPGVKGPDQLKYKGTITDQLEASSSGTSYCLDPCSVQPNFPLPNFCMDGDVQSHPRNSLPFASNLDGLTPDTLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAAISSQSFGVPSMPFKPGCSSDVAINETGVLNNSLWANQSQRMRTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDNENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGNVPISNQACSGTDSGNAWRGQYDDNSAASFNR 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0697 1147 FunFam Auxin response factor 321 393 - -
Acco04g0697 1147 SUPERFAMILY DNA-binding pseudobarrel domain 148 287 IPR015300 -
Acco04g0697 1147 Gene3D - 156 259 IPR015300 -
Acco04g0697 1147 Pfam Auxin response factor 284 366 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Acco04g0697 1147 MobiDBLite consensus disorder prediction 774 832 - -
Acco04g0697 1147 Gene3D - 321 392 - -
Acco04g0697 1147 FunFam Auxin response factor 156 260 - -
Acco04g0697 1147 Pfam AUX/IAA family 1015 1106 IPR033389 -
Acco04g0697 1147 SMART B3_2 158 260 IPR003340 GO:0003677
Acco04g0697 1147 MobiDBLite consensus disorder prediction 740 762 - -
Acco04g0697 1147 CDD B3_DNA 157 249 IPR003340 GO:0003677
Acco04g0697 1147 FunFam Auxin response factor 1015 1109 - -
Acco04g0697 1147 MobiDBLite consensus disorder prediction 514 594 - -
Acco04g0697 1147 Gene3D - 1015 1109 - -
Acco04g0697 1147 SUPERFAMILY CAD & PB1 domains 1033 1098 - -
Acco04g0697 1147 ProSiteProfiles PB1 domain profile. 1020 1113 IPR000270 GO:0005515
Acco04g0697 1147 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 48 607 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco04g0697 1147 ProSiteProfiles B3 DNA-binding domain profile. 158 260 IPR003340 GO:0003677
Acco04g0697 1147 Pfam B3 DNA binding domain 158 259 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0697 Acco-ChrAcco04 5701446 5709150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0697 33 519 B3 DNA Binding Superfamily AT1G19220 82.341 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco04g0697 AUX_IAA 9.8e-10 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0697 04 5701446 5709150 Acco04g0697 04 5701446 5709150 ECH