Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0695 ATGACCTCGAGACTTCTATCAAGTTTCAAAGTGCAGTATATAAAATTAATGGGTTTTATCTTCATTTCTTCAACGCTTTCATTCCTCACTCCCAGAGCTCGGTCGCAAATTAGAATCCTTGCTAAGTTAGTTCACTTCCGATTAAGTTACTCCTTGGACCTTCCAATGGCGACCGCTCAGCTCACAGCATCATCATTTTCTACCATGAATTTGCCCTCGTTCGAAGGTCTTCGACCTTCTGTGGTTCAGTTTTCTGCTGTCGGACACGTTAGACTTCCCGGCCTCACTAAAAGGTCCTTCCGGGGTTTGGTTGTTAAAGCCGCAACTGTTGTTGCCCCTAAGTATACCTCGATTAAGCCGTTGGGTGACAGAGTGCTGGTAAAAATTAAGGGTTTGGAAGAGAAAACTCAAGGTGGGATTTTAATTCCCTCAACTGCTCAAACGAAGCCTCAAGGTGGTGAAGTGGTTGCTATTGGAGAGGAAAAGACGGTTGGGAAGAGCAAAGTTGACTTTGCCGTGAAGCCTGGGGCACAAGTTGTGTATTCAAAATATGCTGGGACTGAGGTGGAGTTTAATGGTTCAAATCATCTTTTACTAAAGGTTGACGACATTGTTGGTATCCTTGAAACAAACGAGATCAAGGATCTTAAACCTTTGAATGATAGAGTGCTGATCAAGGTCGCAGAGGCTGAGGAAAAAACTGCTGGGGGTCTGTTACTGACACAGGGATCAAAAGATAAACCATCTACTGGAACGGTCATAGCAATTGGACCAGGGCCTCTAGATGAGGAAGGCAACAGAAAACCGTTGTCCGTGAGTCCTGGAAACACTGTTCTGTACGCCAAATATGCGGGGAATGAATTCAAGGGCAAGGATGGATCCGACTACATTGTCACAAGAGCCTCAGATGTCATGGCTGTTGTTTCCTAG 930 0.4505 MTSRLLSSFKVQYIKLMGFIFISSTLSFLTPRARSQIRILAKLVHFRLSYSLDLPMATAQLTASSFSTMNLPSFEGLRPSVVQFSAVGHVRLPGLTKRSFRGLVVKAATVVAPKYTSIKPLGDRVLVKIKGLEEKTQGGILIPSTAQTKPQGGEVVAIGEEKTVGKSKVDFAVKPGAQVVYSKYAGTEVEFNGSNHLLLKVDDIVGILETNEIKDLKPLNDRVLIKVAEAEEKTAGGLLLTQGSKDKPSTGTVIAIGPGPLDEEGNRKPLSVSPGNTVLYAKYAGNEFKGKDGSDYIVTRASDVMAVVS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0695 309 Hamap Co-chaperonin GroES [groES]. 215 309 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 FunFam 10 kDa chaperonin 214 309 - -
Acco04g0695 309 Pfam Chaperonin 10 Kd subunit 118 207 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 Pfam Chaperonin 10 Kd subunit 216 308 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 CDD cpn10 117 208 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 FunFam 20 kDa chaperonin, chloroplastic 111 210 - -
Acco04g0695 309 CDD cpn10 216 308 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 PRINTS 10kDa chaperonin signature 295 308 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 PRINTS 10kDa chaperonin signature 238 259 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 PRINTS 10kDa chaperonin signature 216 231 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 PRINTS 10kDa chaperonin signature 273 285 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 SMART Cpn10_2 117 208 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 SMART Cpn10_2 215 308 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 SUPERFAMILY GroES-like 116 209 IPR011032 -
Acco04g0695 309 Hamap Co-chaperonin GroES [groES]. 117 209 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 ProSitePatterns Chaperonins cpn10 signature. 216 240 IPR018369 GO:0005524|GO:0006457
Acco04g0695 309 Gene3D GroES chaperonin 212 309 IPR037124 GO:0006457
Acco04g0695 309 Gene3D GroES chaperonin 110 211 IPR037124 GO:0006457
Acco04g0695 309 PANTHER 10 KDA HEAT SHOCK PROTEIN 115 207 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco04g0695 309 SUPERFAMILY GroES-like 215 308 IPR011032 -
Acco04g0695 309 ProSitePatterns Chaperonins cpn10 signature. 118 142 IPR018369 GO:0005524|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0695 Acco-ChrAcco04 5695940 5698616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0695 56 309 Calmodulin-binding Proteins AT5G20720 71.206 1.32e-123 352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0695 04 5695940 5698616 Acco04g0695 04 5695940 5698616 ECH