LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco04g0688	ATGGCCGCTGTTCAACTTCTCCACCTTTTCTTCTTATTCTTCTTCCTCACTCTTCCTTCTCTGTCTTCTTCTTCCGACGTCGATGCCCTCCTCAAGCTTAAGCAGTCATTCAACAATACTGCTTCTCTTTCTTCATGGGTCCCTAATTCTCCTCCTTGCCGATGGGCCGGAATCATGTGCGACGACGACACCATCATCGGTCTTCATCTTTCCGACATGGGTCTTTCCGGCAACATCGACATTGACGCTGTGTTGCAGATTAAAGGCCTTCGCACCGTCAGCTTGGTCAACAATTCCTTTTCGGGTCCTATCCCAGAGTTCAACAGAGTCGGTGCTATCAAGGCTTTATATCTATCCACCAACCAATTTTCCGGGCAGATTTCCTCGGATTACTTCTCCCATTTAAATTCATTGAAGAAAATCTGGCTTTCTGAGAACAAATTCTCGGGACCAATCCCTGATTCTATATCCCAGCTAGATAATCTCATGGAGATTCACCTCGAGAACAACGAATTCACTGGATCCATTCCACAACTAACGCAGAACATCAAATCGCTGGACATGTCCAACAACAAACTTGAAGGTCCAATCCCAGAGAGCTTAACAAAATTTGGGGTTATTTCCTTCCAGGGAAACGATGGTCTATGTGGGAAACCTTTAGACAAGGCGTGCAACCAGAAGGGTGATGGTGAAAATTCTTCTGGCGGTGGCAGCACCATGTTGGTCATTTTCTTCATTGTTTGCGTGTTCATCGCGGCGTGGCTGTTTGTTTCGATCAGGTCAAGGCGCCGTCTAGACCGTGACTTCAGTGTGCTGAGCAGAGGCAACAGCATGGAGGAGATGGCGCATGTGCACGTGCCGAGCTCAAGCGAAAGCAGGGAATCGAGCCGGAGAGGGACGGGTTCGAAGAAGGGCGCGGCGGCGAAGAAAGAGAGCGGTACGGAACTAGTGGTGGTGAATGAGGAGAGGGGCATGATTGGGATGAAAGATTTAATGAGGGCGGCGGCGCAGGCTATTGGAAACGGACCTTTGGGAAGCACATATAAGGCGGTCTTGGAGAATGGGTTGAGCGTGATGGTGAAGAGGAGTAGAGAGATCAATGAGATAGGCAGAGATATTTTCGACGCCGAGATGAGAGACTTTGCAAGAATCAAACATGCTAACATCTTGACCATTTTGGCTTACAGTTTTAGCAAAGAAGAGAAGTTCATCATCTCAGAGTACATGCCCAAAGGCAGCTTGTTATATGTTTTGCATAGTGATCGGGGGACATCTCATGCCCATTTGACCTGGCCCGTACGCTTGAAGATAATCAAGGGAATCGCACAAGGCCTTCGCTACCTTCATTCTCACTTCTCCTCCTACGATCTTCCCCACGGCAACTTGAAATCCAGCAATGTCCTCCTCACACAAGATTATGAACCACTCCTCTCTGATTACGCTTTACATCCGCTTCTCAACCCTAATTCTTTCCCCGCATTGTTTGCCTTCAAATCCCCAGATTACGTGCAGTACCAGCTAATTTCCCAAAAAACCGACGTCTACTGCCTTGGAATCATCATCCTCGAGATTATCACCGGAAAATTCCCTTCTCAATATCATAGCAACAACAAAGGCGGCACCGATGTTGTGCAATGGGTCCTCGCTGCAATTGCTGAGAGAAGAGAAGCACAAGTGATTGATCCAGAAATAGCAAGCACCCCTAACTCCTTAGATCAGATGCTGCAGATCCTCCAAGTGGGAGCTGCTTGCACCGAAAGTAACCCCGAAAAACGGATTAACTTGAGTGAAGTCATTTGGAGGATAGAGGAGGTACAAGTCTAA	1824	0.4775	MAAVQLLHLFFLFFFLTLPSLSSSSDVDALLKLKQSFNNTASLSSWVPNSPPCRWAGIMCDDDTIIGLHLSDMGLSGNIDIDAVLQIKGLRTVSLVNNSFSGPIPEFNRVGAIKALYLSTNQFSGQISSDYFSHLNSLKKIWLSENKFSGPIPDSISQLDNLMEIHLENNEFTGSIPQLTQNIKSLDMSNNKLEGPIPESLTKFGVISFQGNDGLCGKPLDKACNQKGDGENSSGGGSTMLVIFFIVCVFIAAWLFVSIRSRRRLDRDFSVLSRGNSMEEMAHVHVPSSSESRESSRRGTGSKKGAAAKKESGTELVVVNEERGMIGMKDLMRAAAQAIGNGPLGSTYKAVLENGLSVMVKRSREINEIGRDIFDAEMRDFARIKHANILTILAYSFSKEEKFIISEYMPKGSLLYVLHSDRGTSHAHLTWPVRLKIIKGIAQGLRYLHSHFSSYDLPHGNLKSSNVLLTQDYEPLLSDYALHPLLNPNSFPALFAFKSPDYVQYQLISQKTDVYCLGIIILEIITGKFPSQYHSNNKGGTDVVQWVLAAIAERREAQVIDPEIASTPNSLDQMLQILQVGAACTESNPEKRINLSEVIWRIEEVQV	607

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco04g0688	607	Gene3D	Ribonuclease Inhibitor	23	180	IPR032675	-
	Acco04g0688	607	Gene3D	Transferase(Phosphotransferase) domain 1	409	607	-	-
	Acco04g0688	607	Pfam	Leucine rich repeat N-terminal domain	24	61	IPR013210	-
	Acco04g0688	607	Pfam	Leucine Rich Repeat	182	203	IPR001611	GO:0005515
	Acco04g0688	607	MobiDBLite	consensus disorder prediction	280	309	-	-
	Acco04g0688	607	MobiDBLite	consensus disorder prediction	286	309	-	-
	Acco04g0688	607	Pfam	Leucine rich repeat	114	171	IPR001611	GO:0005515
	Acco04g0688	607	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	11	606	IPR046959	-
	Acco04g0688	607	ProSiteProfiles	Protein kinase domain profile.	333	607	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco04g0688	607	Pfam	Protein kinase domain	337	598	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco04g0688	607	Gene3D	Ribonuclease Inhibitor	183	222	IPR032675	-
	Acco04g0688	607	FunFam	Nuclear pore complex protein NUP107	23	178	-	-
	Acco04g0688	607	Gene3D	Phosphorylase Kinase; domain 1	300	408	-	-
	Acco04g0688	607	SUPERFAMILY	L domain-like	24	219	-	-
	Acco04g0688	607	SUPERFAMILY	Protein kinase-like (PK-like)	337	602	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco04g0688	Acco-ChrAcco04	5612386	5614305	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco04g0688	1	607	Receptor kinase-like Gene Family	AT3G42880	46.468	0.0	581

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Acco04g0688		Pkinase	7e-27	CL0016