Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0687 ATGGGCCAGGTGGCTAGCTTAAACGAAAGCACGAAATCGAGCAAGAAGAAAGAGAATGTGGCTCTGGTGGTGGTGAATGAGGAGAAGGGCATGTTTGAGATAGGGGATTTGATGGAGGCGGTCGCGGAGGTTGTCGGAGACGGAGCACTGGGATCGACGATCAAGGCGACCATGAGGGATGGGTTGAGTATGGTGGTAAAGAGGACGAGAGCAATCAACCAGAAAGGTAGAGATTTTTTCGATGCCAAGATGAGAGCCTTTGGGAGTATCAAACATGCTAACATCTTGCCTATTTTGGCTTACAATTTTCGCAAATCTGAGAAGCTCATCATCTCAGAGTACATGCCCAAAGGCAGCTTGTTTTATGCTTTGCATGTTGATCGAAGGACATCTCATGCTGATCTGACCTGGCCCGTGCACTTGAAGATAATCAAAGGAATCGCACAAGGCCTTCGCTTCCTTCATTCTCACTTCTCTTCCTACGATCTTCCCCACGGAAACCTGAAATCCAGCAATGTCCTCCTCACACAAGATTATGAACCACTCCTTTCTGATTACGCCTTACATTCGCTTCTCAACCCTAATTCTTTCCTATTGTTCGCCTTGAAATCTCCAGATTATGTGGAGCACCAGCTAATTTCCCAAAAAGCCGACGTCTATTGCCTCGGAATCATCATCCTCGAGATCATAACTAGCAAATTGCCTTCTCAGTATCATAGCAACGACGAGGGCAACACTACCGATGTCGTGCAATGGGTCGTCACTGCAATTTCTGAGAGGAGAGAAGCACAAGTGATTGATCCCGAAATAGCAAACACCCCTAATTCCTTGGATCACATGCTGCAGATCCTCCAGTTGGGAGCCGCTTGCATCGAAAGTAACCTCGAACAACGAATTAACTTGAGTGATGTCATCAGGAGGATAGAGGAGGTACAAGTCTAA 942 0.4682 MGQVASLNESTKSSKKKENVALVVVNEEKGMFEIGDLMEAVAEVVGDGALGSTIKATMRDGLSMVVKRTRAINQKGRDFFDAKMRAFGSIKHANILPILAYNFRKSEKLIISEYMPKGSLFYALHVDRRTSHADLTWPVHLKIIKGIAQGLRFLHSHFSSYDLPHGNLKSSNVLLTQDYEPLLSDYALHSLLNPNSFLLFALKSPDYVEHQLISQKADVYCLGIIILEIITSKLPSQYHSNDEGNTTDVVQWVVTAISERREAQVIDPEIANTPNSLDHMLQILQLGAACIESNLEQRINLSDVIRRIEEVQV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0687 313 Pfam Protein kinase domain 42 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0687 313 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 312 IPR046959 -
Acco04g0687 313 Gene3D Transferase(Phosphotransferase) domain 1 115 313 - -
Acco04g0687 313 SUPERFAMILY Protein kinase-like (PK-like) 42 308 IPR011009 -
Acco04g0687 313 Gene3D Phosphorylase Kinase; domain 1 4 114 - -
Acco04g0687 313 ProSiteProfiles Protein kinase domain profile. 39 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0687 Acco-ChrAcco04 5606787 5607837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0687 22 313 Receptor kinase-like Gene Family AT5G20690 55.102 1.30e-118 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco04g0687 Pkinase 3.8e-23 CL0016