Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0621 ATGGAGAGAAACAGTCTGGTGAACAGCAACAAGAACCAAATGGTGAAAGAATATTGGAACAGAAAATCTCAGATAAGCAGTTGTGGAGGAGGAGATGATTATATAAATGGATTTTCATGGCCTCCAAGATCATACACTTGTAGCTTCTGCAAGAGGGAATTCAGATCTGCTCAAGCCCTTGGTGGCCATATGAATGTTCATCGCAGGGACAGAGCCAGGCTCAGGCAGTCACCACCTCCAACTCCAACTCATGAAACTCATCACTCCACCATGCTCAACCTAAATCTTAACCCTACCTCTGGTCCTGACTTCTCAACCTCAACCATGTCTTTGTTACCATCTTCATCTTCTTCTACAATGCTCAAAAAACCATTCTCTGTGGTTTCTCCTACACTTGCTTCTTCATCATCTTCTTATGATCTGAAAAAATGGGTTATGAATGGTATCATGTTGAACCCTTCAAGCACCAAGGCCTCAGAATCTACAAATATGAAGAATGCTACTGATGCACAAGAGGATGGTTGCAAAGCGGTTAAAAATGCTGACATTATTAGGTTGGACTTGCATATAGGTTTGCTTAGTGATTCCAAGGATGATTTAGATCTGGAGCTTCGATTGGGTACTTATGCTTAG 633 0.4186 MERNSLVNSNKNQMVKEYWNRKSQISSCGGGDDYINGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRQSPPPTPTHETHHSTMLNLNLNPTSGPDFSTSTMSLLPSSSSSTMLKKPFSVVSPTLASSSSSYDLKKWVMNGIMLNPSSTKASESTNMKNATDAQEDGCKAVKNADIIRLDLHIGLLSDSKDDLDLELRLGTYA 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0621 210 Pfam C2H2-type zinc finger 45 69 - -
Acco04g0621 210 Gene3D Classic Zinc Finger 41 93 - -
Acco04g0621 210 SUPERFAMILY beta-beta-alpha zinc fingers 42 71 IPR036236 -
Acco04g0621 210 PANTHER OS07G0101800 PROTEIN 19 208 - -
Acco04g0621 210 ProSiteProfiles Zinc finger C2H2 type domain profile. 45 72 IPR013087 -
Acco04g0621 210 SMART c2h2final6 45 67 IPR013087 -
Acco04g0621 210 ProSitePatterns Zinc finger C2H2 type domain signature. 47 67 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0621 Acco-ChrAcco04 4867279 4867911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0621 28 207 C2H2 Transcription Factor Family AT3G23130 40.580 1.16e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco04g0621 zf-C2H2_6 3.8e-07 CL0361