Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0523 ATGTTGCAGGACGTGATTCACGCGACACCGCAAGCTCCACCCCAGGAGGCGGAGGAACTTACCATTATTAGAATCACGCTTCTTCAATCCAAGCTTGTTTTAAATAGGGGTCTATATCCTGAAAACTATTCTGAGTTATATGTGTTTGGTAGATTTTTGGAAGCCATGTTGTTCACAATGCTTTTATATCACTTGGTGCAGGATGAAATCTCAAGCCCCATTAGTGGTCGAATTTTCGAGCTCTGTGACCCTGATTTGTTCCCAGAGAGCCTGCAGAATTGTGAGGTTACCTCTAGCTCTAACTGTTGCTATGAAGATAACTCCTCCTGTGCCCAAAATATATCTCTAGCTTTAGATGTAGACGATAAATTCAACACTTGCAATACAATCACCACCCAAACTAGCACAAATCCGGCCACCAGGACCACCGCCCCGGCTGATCCTACTGCCACCATTACCACCAACAACAACAACACAACCAACAGTAGCAATCTGTCCATTGTCTTTGACCCACAAGATGAAATTGACAATGACATTTCTGCCTCCATAGATTTCTCATCATCTCCTGCTTTTTCTGTCCCTCAATATCTGCCAGTCACAACTCAACAGGATCAGCAATTTGATTTCTCTTCACTGCAGCCTCAGGTCACACTAGCTGCAAGTTCAGTTGTGGATGGCCTTGCACAATACCCACCAGACACTGCTGTTGCACCTCTCATGGGGGCTCCATTAGCTCCTGTTTTTGAAGATGATTGCTTATCCTCTGTCCCTTCTTATGTGCCTCTGAACCCTTCATCTCCTTCTTGCTCTTATCTTAGCCCTGGCATGGGACCTTACATGCCTCTTGGTCCCCTTCATACTGCCATGTCTGCTGATGGTTCTGGGATATATGGCAGCACCATTATTCTGGGTTCTGATCTGCAGCCACCAGAACTGGATTACCAGGGAGAAAATGGTGGACTTTTTTGTCCAGATTCAATTCAAAGGGTTTTCAACCCTCAAGACCTCCAGGCACTTAGTGCTGAGAATCAGCAACTGATATCTGGGGCAGCAAGTTCCACCACTTTGACGCCAGAAATATCAAACTTGGAGAATAATACCTACAAGGTTCGGAGACTTTCTATTGAACAGAGGCAAGAAAAGATTCTTAGGTACTTGAAGAAAAGGCGAGAGAGAAACTTCAGCAAGAAAATCAAGTATGCGTGTCGCAAAACTCTAGCAGATAGCCGGCCTCGGGTCAGGGGAAGATTTGCAAAGAATGATGATTTTGGAGATACTCAGAGACCTGCTAGTAGCATTCATGAAGAGGATGATGAAGACGACATAATTGTGAAGGAAGAAGAAGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGAGTGAATTCCTTCAAATGCAATTATTCCATCCAGTCATGGATTTAA 1431 0.4423 MLQDVIHATPQAPPQEAEELTIIRITLLQSKLVLNRGLYPENYSELYVFGRFLEAMLFTMLLYHLVQDEISSPISGRIFELCDPDLFPESLQNCEVTSSSNCCYEDNSSCAQNISLALDVDDKFNTCNTITTQTSTNPATRTTAPADPTATITTNNNNTTNSSNLSIVFDPQDEIDNDISASIDFSSSPAFSVPQYLPVTTQQDQQFDFSSLQPQVTLAASSVVDGLAQYPPDTAVAPLMGAPLAPVFEDDCLSSVPSYVPLNPSSPSCSYLSPGMGPYMPLGPLHTAMSADGSGIYGSTIILGSDLQPPELDYQGENGGLFCPDSIQRVFNPQDLQALSAENQQLISGAASSTTLTPEISNLENNTYKVRRLSIEQRQEKILRYLKKRRERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTQRPASSIHEEDDEDDIIVKEEEDMVDSSDIFAHISGVNSFKCNYSIQSWI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0523 476 MobiDBLite consensus disorder prediction 417 435 - -
Acco04g0523 476 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 134 440 IPR045281 GO:0009909
Acco04g0523 476 MobiDBLite consensus disorder prediction 417 439 - -
Acco04g0523 476 Pfam CCT motif 378 420 IPR010402 GO:0005515
Acco04g0523 476 ProSiteProfiles CCT domain profile. 378 420 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0523 Acco-ChrAcco04 4039798 4043582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0523 378 436 C2C2-CO-like Transcription Factor Family AT5G57660 46.875 9.72e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco04g0523 CCT 3.8e-19 CL0281