Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0495 ATGTATTGGGGAGGCATGGCTAGTAACAACATGGGTTGGGGTATGAATATGTTAGAGGAAGAAGGTTGGAGGAAAGGTCCTTGGACTGCTGAAGAAGACAGATTGCTTATTGAATATGTCAGGCTTCATGGTGAAGGCAGATGGAACTCTGTCTCTAGGCTTGCAGGATTGAAAAGAAATGGCAAAAGCTGCAGATTGAGGTGGGTGAATTATTTGAGGCCTGACCTCAAGAAGGGTCAGATAACACCTCAGGAAGAGAGTATCATTCTTGAGCTGCATGCTAGGTGGGGAAACAGGTGGTCAACAATTGCAAGAAGCTTACCAGGAAGAACTGACAATGAGATTAAGAACTACTGGAGGACTCATTTCAAGAAGAAGGCGAAAAACTCTCCTGATTCTGCAGAAAAGGCGAAGAATCGCCTCATAAGGAGGCAACAATTTCAGCAGCAACAACAGCAAATGCAGCAGCAGCATCAGCAACATCAACAACAGCAGCAGCAACAGCAACAACTTCAATTCAACTTGGACATCAAAGGGATTATGGCCCTTCTGGAGGAAAATGATAACAGAGTGCCTATGCCTTGTTTGTCTCAAATGAGGCAAGAAATGTATCAGAACTCCGTGGAAGAACAAGGCTGCTTATACTCTATGCTCAATGGCAATGCCTCTGTTCCAGAAACTTCAAATGATGATACTTTCTGGGACGGCCTTTGGAACTTGGATGATCTTCATGGAAATTTCAGTGCAGCAGCAAGCAAAACCAATCTACACAATTTAGTTGCTCCCTTCTGCTAG 795 0.4415 MYWGGMASNNMGWGMNMLEEEGWRKGPWTAEEDRLLIEYVRLHGEGRWNSVSRLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKNSPDSAEKAKNRLIRRQQFQQQQQQMQQQHQQHQQQQQQQQQLQFNLDIKGIMALLEENDNRVPMPCLSQMRQEMYQNSVEEQGCLYSMLNGNASVPETSNDDTFWDGLWNLDDLHGNFSAAASKTNLHNLVAPFC 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0495 264 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Acco04g0495 264 FunFam MYB transcription factor 82 161 - -
Acco04g0495 264 Coils Coil 144 171 - -
Acco04g0495 264 SMART sant 77 125 IPR001005 -
Acco04g0495 264 SMART sant 24 74 IPR001005 -
Acco04g0495 264 SUPERFAMILY Homeodomain-like 22 119 IPR009057 -
Acco04g0495 264 Gene3D - 82 126 - -
Acco04g0495 264 MobiDBLite consensus disorder prediction 144 167 - -
Acco04g0495 264 CDD SANT 27 72 IPR001005 -
Acco04g0495 264 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 209 IPR044676 GO:0003700|GO:0006355|GO:0043565
Acco04g0495 264 FunFam Myb transcription factor 25 77 - -
Acco04g0495 264 Pfam Myb-like DNA-binding domain 78 122 IPR001005 -
Acco04g0495 264 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Acco04g0495 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 72 IPR017930 -
Acco04g0495 264 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Acco04g0495 264 Gene3D - 25 77 - -
Acco04g0495 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Acco04g0495 264 CDD SANT 82 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0495 Acco-ChrAcco04 3796996 3798087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0495 18 264 MYB Transcription Factor Family AT4G13480 56.180 1.54e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco04g0495 Myb_DNA-binding 1.6e-16 CL0123