Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0490 ATGCTTGTTCTGCAACTCATCATCTCATCTTTGATATTGTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCAGTTACAGTGTCCATCAATGGCGACGGAGATTTCACCACAATTGGACAAGCCATAGCAGCAGCTCCTTCCCACAGCAACACAAAACACACCATCCTCGTCCGACCAGGAACCTACGAGGAACATCTCCAAATCCCCCGCGACAAAACCAACATTCTTCTCATCGGTGGCGGCCGCCACAATACCATCCTCCTCGGACACCACAATGGTGGCACCTTGACTGGAACCGCCACCCTAGCAATTCACGGAGCGGGCTTCGTGGGCCAAGGTATGTCCATTGTGAATTCAGCTGGGCCGAATGCAGGCCCTGGAATAGCTCTGCTGAACACGGCGGACCGGTCGGTGTTGTACAACTGCTCCGTCGAGGGCTATCAAGACACCTTGTGGGCTTCAACGGGCCGTCAATTTTACCGGGAATGCCACATCTACGGCTCCGTCGACTTCGTCATGGGGAACGCCGCCGCCGTTTTTCAAAACTGCATGCTCTACGCCCGCCTCATCACCGGCTTCTCCGCCTTCACCGCCCAGTCCCGCGACGACCCTCTGCAACGCACCGGTTTCGTTTTCCATTATTGTCGTTTCACGGTGTCTCCGGAGGACGCCGGGAAGAAATTATCCGGTGCGGACAAAGCTATTTTAGGACGGCCATGGAGGGCGTATTCGAGGGTGGTGATCATGCAGTCGTATATTGATGATATAGTGAGTCCGATGGGGTGGGGAGAGATGAAGGGGACGCCGACCGGTCAGGTGACTTACGTGGAGTTTGAGAATGAAGGGCCTGGATCGAGTACACGTGGCAGGGTGAAGTGGACTGGTGTGGTGGAGGTGCACGATAAGGAACAGGTGGAGGAGTTCACCGTGTCGAGGTTCATAAAAGGCGATGATTGGATTCCTCCAACTGGGGTTCCATACACTGGAGGAATATTATAA 1002 0.5379 MLVLQLIISSLILLSSSSSSSSSSAVTVSINGDGDFTTIGQAIAAAPSHSNTKHTILVRPGTYEEHLQIPRDKTNILLIGGGRHNTILLGHHNGGTLTGTATLAIHGAGFVGQGMSIVNSAGPNAGPGIALLNTADRSVLYNCSVEGYQDTLWASTGRQFYRECHIYGSVDFVMGNAAAVFQNCMLYARLITGFSAFTAQSRDDPLQRTGFVFHYCRFTVSPEDAGKKLSGADKAILGRPWRAYSRVVIMQSYIDDIVSPMGWGEMKGTPTGQVTYVEFENEGPGSSTRGRVKWTGVVEVHDKEQVEEFTVSRFIKGDDWIPPTGVPYTGGIL 333
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0490 333 PANTHER PECTINESTERASE 24 322 - -
Acco04g0490 333 FunFam Pectinesterase 4 22 332 - -
Acco04g0490 333 Gene3D - 19 332 IPR012334 -
Acco04g0490 333 SUPERFAMILY Pectin lyase-like 20 331 IPR011050 -
Acco04g0490 333 Pfam Pectinesterase 26 318 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco04g0490 Acco-ChrAcco04 3769365 3770770 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0490 23 333 Carbohydrate Esterase AT4G02330 44.062 1.23e-85 267