Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0486 ATGGCAATGGCGAATTGCTCCCTCGACCTCGCACAGTACTTCGGCGGCTCCAACTTCACCAACTCCACAGCTGCCGCCGACTTCATCTGTAACAAGTTCAACGACACCACCTTCGCCGTCGACAACACCTTCCTCCTCTTCTCTGCCTACCTTGTATTCTCCATGCAGCTCGGCTTCGCCATGCTCTGTGCCGGTTCCGTTCGCGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTAGACGCCGCTGCTGGCGGCCTCTTCTACTACCTCTTTGGCTTCGCTTTCGCCTTCGGAACCCCCTCCAACGTATTCATCGGTCGTCACTCCTTCGGCCTCACCGACTTCCCGTCGACTAACTTCGATTATAGCTACTTCCTCTACCAATGGGCCTTCGCCATCGCCGCCGCCGGCATAACCAGCGGCTCCATCGCCGAACGGACTCAATTTGTCGCTTACCTAATCTACTCCTCTTTCCTGACTGGGTTCGTTTACCCTGTTGTGTCTCATTGGATCTGGTCCATGGACGGTTGGGCTAACGCGGGTCACAAAGATCTTCTATTCGGATCTGGAGCCATCGATTTCGCCGGATCGGGTGTAGTCCACATGGTCGGCGGTATCGCTGGTCTGTGGGGCGCACTCATAGAAGGGCCTAGGATTGGCCGGTTTGATCATTCCGGTCAACCGGTCTCGCTTCGCGGGCACAGTGCTACCTTGGTTGTTCTCGGAACTTTCTTGCTCTGGTTCGGGTGGTACGGGTTTAACCCGGGTTCGTTCTTGAAGATTCTGAACCATTACCAGCCGGGAAACTACTACGGGCAGTGGAGCGCGGTGGGCAGAGCCGCTGTGACTACCACTTTAGCTGGCTGCACTGCCGCGCTGACGACTCTATTCGGGAAAAGGATTGACTCGGGCCATTGGAACGTGACGGACGTGTGCAATGGGCTGCTCGGCGGATTTGCCGCCATCACAGCTGGATGCTCCGTCGTGGAGCCATGGGCGGCTATCATTTGCGGGTTCATAGCGGCAGTGGTGCTAATTTTATGCAATAAACTTGCGGAGAAGTTGAAGTTTGACGACCCGTTGGAGGCTGCGCAGCTGCACGGCGGGTGCGGCGCGTGGGGGCTGATCTTCACGGCGTTGTTCGCAAAGAAGAAGTACGTGAACGAGGTGTATGGAGGGCCGGAGGATCGGCCGTTTGGGTTGTTTATGGGTGGCGGAGGCAAGCTACTGGCGGCAAATGTAGTGGAAATTCTGGTGATTATTGGGTGGGTCAGTGTTACTATGGGTCCTCTATTCTTCATTCTTCACAAGCTTCAACTATTGCGAATCTCGAGAGAAGACGAATTGGAAGGTATGGATTTGACACGACACGGTGGGTTTGCATATGCATACGAGGATTCATCCTTAAACAATGGGCCGAGACAGTTGGAGATGGAAAGAATGGCAAATAACGCAGTCGATCAAACTAGAGATAGGTAG 1485 0.5455 MAMANCSLDLAQYFGGSNFTNSTAAADFICNKFNDTTFAVDNTFLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNVFIGRHSFGLTDFPSTNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWIWSMDGWANAGHKDLLFGSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGQPVSLRGHSATLVVLGTFLLWFGWYGFNPGSFLKILNHYQPGNYYGQWSAVGRAAVTTTLAGCTAALTTLFGKRIDSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFIAAVVLILCNKLAEKLKFDDPLEAAQLHGGCGAWGLIFTALFAKKKYVNEVYGGPEDRPFGLFMGGGGKLLAANVVEILVIIGWVSVTMGPLFFILHKLQLLRISREDELEGMDLTRHGGFAYAYEDSSLNNGPRQLEMERMANNAVDQTRDR 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0486 494 NCBIfam ammonium transporter 41 464 IPR001905 GO:0008519|GO:0016020|GO:0072488
Acco04g0486 494 FunFam Ammonium transporter 22 478 - -
Acco04g0486 494 PANTHER AMMONIUM TRANSPORTER 29 460 - -
Acco04g0486 494 ProSitePatterns Ammonium transporters signature. 195 220 IPR018047 GO:0008519|GO:0016020|GO:0072488
Acco04g0486 494 Pfam Ammonium Transporter Family 44 464 IPR024041 GO:0008519|GO:0016020|GO:0072488
Acco04g0486 494 SUPERFAMILY Ammonium transporter 40 445 - -
Acco04g0486 494 Gene3D Ammonium transporter AmtB like domains 16 480 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0486 Acco-ChrAcco04 3729509 3730993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0486 3 479 Inorganic Solute Cotransporters AT4G13510 77.160 0.0 750