Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco04g0476 | ATGAGGTGGCTGGCCATTACACTCAACAGAATTGAAGTGAACGTAGTTGAGCTAGTAAAAGTGCCTAAGTGTATTTCATCTGGATTAGCCTATAATGCGACTTCAATAAATTTCAGAGTTGGAACTGAAGTTTTTGTTGAGGACCCTGAGGTAGCTTGGATAGATGGAGAAATTGTGGAAACTAATGGCGAAGAGATCAAAGTCAAGTGTGCATCAGACAAGATGGTTGTGGTCAAAGCATCCAATGTCCATCCCAAGGATCCTGAGTTCCCTCCTTCTGGTGTGGATGATATGACAAGGCTGGCATATCTGCATGAGCCAGGGGTTCTCCAGAATTTGCAGATTCGATATGACAACAGTGAAATATATACATACACAGGGAATATATTGATTGCTGTGAACCCTTTTCAAAGATTACCTCATTTGTATGGCCACGATGTGATGGAAAAATATAAAGGAGCAGCGATTGGGGAATTGACACCACATCCTTTTGCAATTGCTGATTCTGCATATAGGATGATGTTAAACGAAGGAACAAGCCAAGCAATTTTGGTCAGTGGTGAAAGTGGAGCCGGGAAAACTGAGAGCACAAAGATGCTTATGCATTATCTTGCCTTTATGGGCGGGAGAAAGGAATCTGAGGGACGATCGGTGGAGCAGCAAGTTCTAGAGTCCAATCCTGTTCTAGAAGCATTTGGCAATGCAAAGACAGTTAGAAACAATAATTCAAGTCGATTTGGGAAGTTTGTGGAGCTGCAGTTTGATCATACGGGGAGAATTTCAGGTGCTGCTATTAGAACTTATTTGCTGGAACGATCCCGCGTCTGTCAAGTTTCAGACCCTGAGAGAAACTACCATTGTTTTTACATGATTTGCGCTGCACCAGAAGAGGATCTTAAAAGGTTTAAATTGGAAAATCCAAGAACATATCATTACTTAAACCAATCAAATTTCTTCGAATTGGACGGATTGGATGAAACCAAGGAGTACCTTGCAACTAGGAGAGCTATGGAGGTTGTTGGAATCAATTCTGATGAGCAGGATGCTATATTCAGAGTAATATCTGCAATACTTCATTTAGGAAACATTGAATTTCAGAAGGGGGATGAGCCGGATTCCTCTGAACCCAAGGATGATCAATCTCGTTACCACCTAAAAACCACGGCTGAACTTTTGATTTTACTATTTCTTAATGCTAGGTGCGACGAGAAGTCACTTGAGGACTCCTTGTGTAAACGTGTCATGGTAACACGTGGTGAGGCCATAACAAAGTGGCTTGCTCCAAATTCGGCAGCTCTCAGCAGAGATTCATTGGCTAAAGTAGTTTACTCAAAGCTGTTTGACTGGATTGTAAACAGGATTAATAACTCTATCGGTCAAGATCCAAATGCGAAGAACTTAATTGGGGTTCTGGATATATACGGATTCGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGTATCAACCTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTAACTGGAGTTATATAGAGTTCATTGATAATCAGGATGTCCTTGATCTCATCGAGAAGAAACCTGGCGGCATCATTGCTCTTCTTGATGAGGCTTGCATGTTTCCAAGATCAACACACGAAACATTTGCCGAAAAGTTATATCAAACTTATAAAGACAATAAACGCTTCAGCAAACCAAAGTTGTCTCGTACTGATTTCACCATCTGCCACTATGCTGGTGATGTCACTTATCAGACTGACTTTTTCCTCGACAAGAACAAAGACTACGTTGTCCCAGAGTTCGAGGAACTACTCAATGCTTCAAAGTGCTCCTTCGTTTCAGAATTGTTTCCACCTCCACCTGAGGAAACTTCCAAATCATCAAAGTTCTCCTCAATAGCCACCCAGTTTAAGGTATGTTTAACTTTTCAGGTATGCTTGCAGTCAGGGGCGGAGCTAGGATTTGTAGATGAGGGTGGCGAGACTATAAAGGAAAGTCAACAACTGCAATCTTTGCTTGAAACGCTGAATGCTACGGAGCCACATTACATTCGTTGCATAAAGCCGAATAATCTTCTCAGGCCAAGGATATTTGAGAACACTAATGTTTTACAGCAGCTTCAATGCGGGGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATACCCTACTAGAAAGCAATTTGATGAATTTGTTAAGCGGTTTGGAATTTTGGCGCCTGATGCTCTAAAAGAATGCCTTGATGAGAGTACTGCTTGCATGAAGCTTTTAGGACGAGTGAATCTTGAAGATTATCAGGTGGGCAAGACTAAAATATTTCTAAGAGCAGGACAGATGGCAAAACTAGATGCATTTCGTGCTGAAGTCTTGGGACGATCTGCAATCATTATTCAGAGTAAAATCCGCTCCTTTTTTTGCCACAAAAAATACGTTCTGTTGCGGTTGTCTGCCATACAAGTACAAACAATCTTAAGAGCCGTTTCCATTCAAACCGGCATGCGCTGCATGGCTGCTAGAAATGAGCTCAAGTGCAGAAGGCGGACGGAAGCTTCAATTGTCATCCAAACTCACTGCCGAGGTTATGTAGCCTACCTCCAACTCCAGAGGCTAAGGGAAGCAGCACTCATTATACAGTGTGTCTCGAGAGGACAAATGGCTCGTAATGAACTTCGAAAGCTTCAAATGGCTGCTAGGGAAACTGGTGCTCTCAAAGCTGCCAAAGAAAAACTTGAAAAGGAAGTTGAAGAACTAAATTCTTCTCTACAAATGGAGAAGAAGATGATGGCTGATTTTGAACAGAAAAATGCAAAATTGCAATCTGCCTTGGAAGAGACTAAGGAGGAAAATTCAAAATTGCAATTTGCCTTGGAAGAGACTAAGGAGAAAAATTCAAAATTGCAATCTGCTTTGGAAGAAATTAAGGAGGAAAACGCAAAACTGCAAACTTCCTTCGAAGAGACTAAGGCATTGCTCTTTCGGGAGCGCCAGGCAGCAAAAACTGTGGGTGAGCCAAATTCTAATACAGAAGAGTTTCCTGTTGTTGATAATGATTTGATCAAGAAGTTAACAACAGAAAACGAAAATCTCAAGGAACTGATTAAGTCACTGGAAAAGAAAGTTGTTGACACCGAGAGGAAATCTGTAGAAAGTGAGGGCAAGCTTACTCAAGACCAAGATGCTAAGTCACCATCCATTCAAGAGCATGATGCGACAAGCCAAGCAGTTGATTTATCTTCTGGTATACATGAATTTCCAGTTGGTGACAATGAATTGAACAATAAGCTTGCTGCAGAGAATGAACATCTCAAGGCACTGGTTAATTCATTAGAAAAGAAAATTGACGAAAGTAACGGGCTTAGTGAAGAGCGCTTGAAGCAAGTGACAGAAGCTGAAATGAAAGTAATTGAGCTGAAGATGACTATGCAGAGGCTTGAAGAAAAACTATCTGATATAGAAACCGAGGATCAAATTTTGAGGCAGCAGGCTCTACTGAGTTCATCTTCTAGGAGAATGTCAGGAAATTTATCATTTTCTACTTCTCAGCCTTCAGAGAATGGTCATGGTGATGCGAATACTCTAAGAAAAAAATTTGGTACTGAGGCTGATGAGTTGAGGAAATCTCTGTCTGAAAGACAACAAGAGAGTGTAGAAACTCTTCTGAAATGCGTGGCAGAAGCAGACCTTGGGTTTAGTGAAGGCAAACCGGTTGCAGCTTATACCATTTACAAGTGTTTTCTGCACTGGAAATCTTTTGAAGCAGAAAAGACGAGTGTATTTGATCGGCTTATTCAGTTGGTTGGTTCTGCTATAGAGGATCAGGACAATAATGATCACATGGCTTATTGGTTATCCAATACATCTGCATTGTTATTTATTCTTCAGCAAAGTCTCAGACCACCTTCAGCACAGAAGCCTCCCCCCCCTGCAAAATTCTTTTTCGGAAGGATATCCCAAAGTTTTCGTTCATCCACTGCCGGTACCTCACTTGATACAATTCGCCACGTTGATGCCAAGTATTCAGCTTTGCTTTTCAAGCAGCAACTTACTGCATATGTGGAAAAGATTTATGGAATTGTTCGAGATAATTTGAAGAAGGACTTGTCGCCTTTGCTTACTTCTTGCATTCAGGCACCTAAAACATCAGAGCAAAGCCTGTCAGATGAACGGTCAACTGATAATAGCGTCCCGGCTGGTTCTTGGCAGAACATTATTGATTGCCTTAACAAATTTCTCAATATGATGAAAGAAAAACATGTGCCTCCTGTTCTAGTTCAGAAGATATTGACCCAGGTTTTCCAGTACATCAATGCGCAACTCTTTAATAGCCTCCTTTCAAACAAAGAACATTGCACATTTACTAATGGACAATATCTAAAATTGGGATTGGCTGAACTAGAAAAATGGTGTATTGAAGCCACCGAAGAGTCTGCTGGTTCATCTTGGGATGAACTCAAACCTGTGAGGCAAGCGGTTGGATTCTTGGCTAAAAGTGAGAAGACCACGATATCCTATGATGATCTCACTAATGATCTGTGTCCTATCCTGAGTGCTCATCAGCTTTACAAAATCTGTTTACTTTACGGGGATGGTTGTGACAGTCAACAATGCGTATCAACAGATGTAACTACAAGGTTGAAGCTTCTAATAACAGATGATACACATGAAGACAGCGACTCCTTCATGTTGGAAGATAATTCAAGTATCCCATACTCAGTTGATGAACTTTCTCATTCCCTTCATGGAGATAACTCGAGGGGATTGAAAATTAACATGTATGATGGGAGGCATTGTTCTCGTAACAAAGTTGTTCTGCCACGAATTGGCCACTGTTGTAAGAACATTGCTCTTTGTAATATTGTAAGGGTATTCTCGGCAATATGTAAACTACGCATATATGTATCATTTTCAGCTTCAATGAAAGTGAAAGGAAGTTTTTCTTCCATCATATTGGCTGCACAAACTACGATACCATGCCTTGTTGACATGGAGTACTTTCCACTCATCTTAATTCCTGTTCTATTGCGCGTAAATTCACAGTATGACGTAGCAGTTGACTAA | 5091 | 0.409 | MRWLAITLNRIEVNVVELVKVPKCISSGLAYNATSINFRVGTEVFVEDPEVAWIDGEIVETNGEEIKVKCASDKMVVVKASNVHPKDPEFPPSGVDDMTRLAYLHEPGVLQNLQIRYDNSEIYTYTGNILIAVNPFQRLPHLYGHDVMEKYKGAAIGELTPHPFAIADSAYRMMLNEGTSQAILVSGESGAGKTESTKMLMHYLAFMGGRKESEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDHTGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMICAAPEEDLKRFKLENPRTYHYLNQSNFFELDGLDETKEYLATRRAMEVVGINSDEQDAIFRVISAILHLGNIEFQKGDEPDSSEPKDDQSRYHLKTTAELLILLFLNARCDEKSLEDSLCKRVMVTRGEAITKWLAPNSAALSRDSLAKVVYSKLFDWIVNRINNSIGQDPNAKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAEKLYQTYKDNKRFSKPKLSRTDFTICHYAGDVTYQTDFFLDKNKDYVVPEFEELLNASKCSFVSELFPPPPEETSKSSKFSSIATQFKVCLTFQVCLQSGAELGFVDEGGETIKESQQLQSLLETLNATEPHYIRCIKPNNLLRPRIFENTNVLQQLQCGGVMEAIRISCAGYPTRKQFDEFVKRFGILAPDALKECLDESTACMKLLGRVNLEDYQVGKTKIFLRAGQMAKLDAFRAEVLGRSAIIIQSKIRSFFCHKKYVLLRLSAIQVQTILRAVSIQTGMRCMAARNELKCRRRTEASIVIQTHCRGYVAYLQLQRLREAALIIQCVSRGQMARNELRKLQMAARETGALKAAKEKLEKEVEELNSSLQMEKKMMADFEQKNAKLQSALEETKEENSKLQFALEETKEKNSKLQSALEEIKEENAKLQTSFEETKALLFRERQAAKTVGEPNSNTEEFPVVDNDLIKKLTTENENLKELIKSLEKKVVDTERKSVESEGKLTQDQDAKSPSIQEHDATSQAVDLSSGIHEFPVGDNELNNKLAAENEHLKALVNSLEKKIDESNGLSEERLKQVTEAEMKVIELKMTMQRLEEKLSDIETEDQILRQQALLSSSSRRMSGNLSFSTSQPSENGHGDANTLRKKFGTEADELRKSLSERQQESVETLLKCVAEADLGFSEGKPVAAYTIYKCFLHWKSFEAEKTSVFDRLIQLVGSAIEDQDNNDHMAYWLSNTSALLFILQQSLRPPSAQKPPPPAKFFFGRISQSFRSSTAGTSLDTIRHVDAKYSALLFKQQLTAYVEKIYGIVRDNLKKDLSPLLTSCIQAPKTSEQSLSDERSTDNSVPAGSWQNIIDCLNKFLNMMKEKHVPPVLVQKILTQVFQYINAQLFNSLLSNKEHCTFTNGQYLKLGLAELEKWCIEATEESAGSSWDELKPVRQAVGFLAKSEKTTISYDDLTNDLCPILSAHQLYKICLLYGDGCDSQQCVSTDVTTRLKLLITDDTHEDSDSFMLEDNSSIPYSVDELSHSLHGDNSRGLKINMYDGRHCSRNKVVLPRIGHCCKNIALCNIVRVFSAICKLRIYVSFSASMKVKGSFSSIILAAQTTIPCLVDMEYFPLILIPVLLRVNSQYDVAVD | 1696 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco04g0476 | 1696 | FunFam | Myosin 2 | 343 | 468 | - | - | |
| Acco04g0476 | 1696 | MobiDBLite | consensus disorder prediction | 1180 | 1204 | - | - | |
| Acco04g0476 | 1696 | Gene3D | - | 283 | 341 | - | - | |
| Acco04g0476 | 1696 | Gene3D | Kinesin motor domain | 96 | 728 | IPR036961 | - | |
| Acco04g0476 | 1696 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 837 | 910 | IPR027417 | - | |
| Acco04g0476 | 1696 | Coils | Coil | 1030 | 1064 | - | - | |
| Acco04g0476 | 1696 | CDD | MYSc_Myo11 | 107 | 786 | IPR036018 | - | |
| Acco04g0476 | 1696 | Pfam | IQ calmodulin-binding motif | 860 | 874 | IPR000048 | GO:0005515 | |
| Acco04g0476 | 1696 | Pfam | IQ calmodulin-binding motif | 882 | 902 | IPR000048 | GO:0005515 | |
| Acco04g0476 | 1696 | Pfam | IQ calmodulin-binding motif | 803 | 821 | IPR000048 | GO:0005515 | |
| Acco04g0476 | 1696 | ProSiteProfiles | IQ motif profile. | 858 | 884 | IPR000048 | GO:0005515 | |
| Acco04g0476 | 1696 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 39 | 88 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco04g0476 | 1696 | SMART | MYSc_2a | 87 | 799 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco04g0476 | 1696 | SMART | DIL_2 | 1437 | 1544 | IPR002710 | - | |
| Acco04g0476 | 1696 | MobiDBLite | consensus disorder prediction | 1180 | 1199 | - | - | |
| Acco04g0476 | 1696 | Pfam | Myosin head (motor domain) | 95 | 786 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco04g0476 | 1696 | PRINTS | Myosin heavy chain signature | 123 | 142 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco04g0476 | 1696 | PRINTS | Myosin heavy chain signature | 180 | 205 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco04g0476 | 1696 | PRINTS | Myosin heavy chain signature | 520 | 548 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco04g0476 | 1696 | PRINTS | Myosin heavy chain signature | 227 | 254 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco04g0476 | 1696 | PRINTS | Myosin heavy chain signature | 467 | 495 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco04g0476 | 1696 | Gene3D | - | 733 | 796 | - | - | |
| Acco04g0476 | 1696 | Pfam | DIL domain | 1438 | 1538 | IPR002710 | - | |
| Acco04g0476 | 1696 | PANTHER | MYOSIN | 85 | 1524 | - | - | |
| Acco04g0476 | 1696 | FunFam | unconventional myosin-Va | 860 | 908 | - | - | |
| Acco04g0476 | 1696 | Gene3D | - | 801 | 859 | - | - | |
| Acco04g0476 | 1696 | Gene3D | - | 860 | 909 | - | - | |
| Acco04g0476 | 1696 | Gene3D | - | 477 | 689 | - | - | |
| Acco04g0476 | 1696 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 66 | 837 | IPR027417 | - | |
| Acco04g0476 | 1696 | Coils | Coil | 1138 | 1172 | - | - | |
| Acco04g0476 | 1696 | CDD | MyosinXI_CBD | 1221 | 1584 | IPR037975 | GO:0007015 | |
| Acco04g0476 | 1696 | MobiDBLite | consensus disorder prediction | 1055 | 1086 | - | - | |
| Acco04g0476 | 1696 | ProSiteProfiles | Myosin motor domain profile. | 93 | 798 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco04g0476 | 1696 | FunFam | Myosin heavy chain | 283 | 338 | - | - | |
| Acco04g0476 | 1696 | ProSiteProfiles | Dilute domain profile. | 1271 | 1562 | IPR002710 | - | |
| Acco04g0476 | 1696 | Coils | Coil | 904 | 1001 | - | - | |
| Acco04g0476 | 1696 | FunFam | Class V myosin | 477 | 617 | - | - | |
| Acco04g0476 | 1696 | MobiDBLite | consensus disorder prediction | 1068 | 1086 | - | - | |
| Acco04g0476 | 1696 | SMART | iq_5 | 880 | 902 | IPR000048 | GO:0005515 | |
| Acco04g0476 | 1696 | SMART | iq_5 | 832 | 854 | IPR000048 | GO:0005515 | |
| Acco04g0476 | 1696 | SMART | iq_5 | 800 | 822 | IPR000048 | GO:0005515 | |
| Acco04g0476 | 1696 | SMART | iq_5 | 857 | 879 | IPR000048 | GO:0005515 | |
| Acco04g0476 | 1696 | Coils | Coil | 1103 | 1130 | - | - | |
| Acco04g0476 | 1696 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 343 | 639 | - | - | |
| Acco04g0476 | 1696 | ProSiteProfiles | IQ motif profile. | 881 | 910 | IPR000048 | GO:0005515 | |
| Acco04g0476 | 1696 | Pfam | Myosin N-terminal SH3-like domain | 41 | 83 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco04g0476 | Acco-ChrAcco04 | 3631415 | 3647549 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco04g0476 | 33 | 1591 | Myosins gene family | AT1G04600 | 55.613 | 0.0 | 1830 |