Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0453 ATGTCTGGGAATTTCAATAAAAGGAGAGCGTTGGAAGACAGGTGTTCTGGTATTCTCCTATTATTCACTTTACTTCTTTATACTACAGAGGGATTGAACACAGAGGGGCAATATCTGCTCGAGCTGAAGACTAGTCTTCATGATGAATCCAATCACTTGGCAAATTGGAAGTCAACTGATGAAACGCCTTGTGGATGGACGGGTGTAAATTGCACATATGACTATAATCCAGTGATCTGGTCCCTTGATTTGAGTTCAATGAATCTTTCTGGAACTCTAAATCCTAGCATTGGAGGTCTCACACATCTAACTTATCTCAGTCTTGCCTACAACGGGCTGATGGGAAATATACCCAATGAAATTGGAAATTGCTCGAGCTTGGAATTTCTTTTTTTGAACAATAATCGATTCAGTGGACAAATTCCTGCTGAATTCGGAAAGCTGTCCCTTTTGAGAAGTTTGAATATTTGCAACAACTTGCTCTCTGGTTCTCTGCCAGAGGAACTGGGAAACTTGTCTTCATTAGTTGAGCTTGTAGTCTTCACAAACAATTTCACCGGTCCCCTGCCTCATTCTATTGGAAATCTAAAGAGTCTCACGACTTTGAGAGCTGGTGGAAATGGATTGTCCGGTAGCTTGCCAAGTGAGATCGGTGGATGTACGAGCATGGAGTTTCTGGGCCTTGCTCAAAATCAGATAGGAGGAGAACTACCAACAGAGATTGGGATGCTTCAGAACTTGAGAGAACTTCTTTTATGGAATAACCAATTATCAGGGCTTATTCCTAAAGAGATTGGGAATTGTACCAGCCTTGAAACTCTTGCTTTATATGGAAATGCTCTTGTTGGATATATACCTGAGGAGATTGGGAATCTCAAATCTCTGGGGAGGTTGTACCTTTACAGAAATAAGTTGAATGGAACAATTCCAAGGACAATTGGGAATCTTTCTCTGGCATTAGAAATTGATTTCTCAGAAAACTCTTTGATGGGTGATATTCCTTCTGAGATCAGCAAAATAAGTGGTCTCCAGTTGCTCTTTCTCTTTGAGAACCAACTATCAGGTGTTATACGCTATGAGTTTAGTAGCTTGAGGAACCTGACAAGGCTGGACCTATCTATTAATAATCTCACAGGTTCAGTTCCATTGGGGTTCCAGTACTTGACTCAAATGACTCAGTTGCAACTTAATGACAACTCTCTAACTGGAAATATTCCTCAAAGCCTTGGACTTTATAGTCCTCTTTGGGTAGTTGATTTTTCTGACAATGAATTGACTGGAACAATACCTCCCCATCTATGTCGAAATTCTAAGTTGATGTTGTTGAGTTTAGCTTCTAATCGGCTGTATGGAAATATACCAACAGGCATCCTGAACTGTGAAACATTGGCACTGTTACTATTGGTTGAGAATAGTCTTACTGGTGGCTTTCCTTCACAACTGTGCCAACTAGTGAACCTAACCGCCGTTGAGCTGAACCAGAACAGGTTCAGTGGTCCTATTTCTCCTGACATTGGGCGGTGCCACAAGTTGCAGAGGCTACATATTGCTAACAACTACTTCACATTAGAGTTGCCTAAAGAAATAGGAAACCTTTCTCAGTTAGTGACCTTCAATGTGTCGTCTAATTCTTTCACTGGACCAATCCCACCTGAAATTGTTAGATGCAAGAAGCTTCAGCGAATTGATCTCAGCCGCAACAGCTTTACTGGTTCCCTACCAGATGAGCTTGGAACACTGTCGCAGTTGGAGATTCTCAAGGTCTCAGATAATAAGCTTACTGGTCATATTCCTCCAACATTAGGTAATCTGCTTCGTTTGACTGCATTGCAGATGGGTGGCAATTTATTTTCTGGGGAAATACCTCCTGATCTGGGTAATCTCACAAGCTTACAGATTGCATTGAATCTCAGTAACAATAACCTTACTGGAAGTATACCTGATAAACTTGGCAATCTCTATATGCTTGAGTCTCTCCTTCTCAACAATAATAATCTGAGTGGTGAAATTCCCAGCACATTTGAAAACCTTTCAAGCTTGATGGGGTGTAATTTCTCTTACAACAATCTTTCTGGACCTATACCTTCCATTCCACTATTTCAAAATATGGCAACTAGCAGCTTTATTGGTAACAATGGCCTTTGTGGTGCTCCTCTGCTTGGCTGCAACATTAATCCATCTTCTCTTTCTCATCCTCCTATGAATAATGTTTCTTCTCGCACCAAGATCATCACTATTATTGCAACAGTCATTGGCGGCATTTCTCTCATTCTAATAGTATTCATTTTATATTTAATGAGACGTCCTCCTGAGCCTGTTTCTTCATTGAGGGATTCTGAGATTCCCTCCTCAGATTCAGATATCTATTTTCCTCCAAAAGATGGCTTCACCTTCCATGATCTGCTTGAAGCTACCAACAACTTTCATGACGGTTATGTTATTGGAAAAGGGGCTTGTGGAACAGTTTATAAGGCTGTGATGCCAACTGGGAAGACCATTGCTGTTAAATTGTTGGCATCCAACAGGGAAGGGAACAACATCGACAATAGCTTCCAGGCTGAGATATTAACTCTTGGAAAGATAAGGCATCGAAATATAGTGAAGTTGTATGGATTTTGCTATCACCAAGGAAGCAATCTGCTACTATATGAGTACATGGCAAGGGGTAGCCTAGGGGAGCAACTTCATGGATTTGCATGTAATTTGGAATGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCAGAGGGTCTTGCTTACTTGCATCATGACTGCAAACCAAAGATCATTCACCGTGATATAAAATCGAACAATATTTTACTTGATGAAAACTTTGAGGCTCATGTGGGTGATTTTGGTTTGGCAAAAATCATTGACATGCCTCAATCAAAGTCAATGTCAGCAGTTGCTGGATCATATGGTTATATTGCCCCTGAATATGCATACACCATGAAGGTCACTGAGAAGTGTGACATCTATAGCTATGGAGTTGTGCTATTGGAGTTGCTAACTGGAAAAACTCCGGTTCAGCCGCTAGAGCAAGGAGGCGATCTGGTGACATGGGTCAAAAACTATATCCGGAGCCATAACAACACACTGTCCTCTGGTGTGTTTGACACTCGTCTCAATCTCCAAGATCAAACCACTGTGAACCACATGCTCACTGTCCTCAAAATTGCTTTGCTCTGCACAAACATGACCCCTACCGATCGCCCATCGATGCGCCAAGTCGCGTTGATGCTCATAGAATCCAACGAGCGAGAAGGAAACTTGGCCAATATTTCTCCATCTCGGTATGAGGATTCCACTTCCAAAGAAGATGATGAGCAAAAGATTGAAGCAGTCATCAAAGACATGACTTCTCCTGCCGAGCCTGCAGGGCTTGTCCTGTCTGATTTGCCAGATGCAGAGAGTGCACTGGGCATGATCCCACTTCATGGTGAGAATGGCGAGTGA 3456 0.4201 MSGNFNKRRALEDRCSGILLLFTLLLYTTEGLNTEGQYLLELKTSLHDESNHLANWKSTDETPCGWTGVNCTYDYNPVIWSLDLSSMNLSGTLNPSIGGLTHLTYLSLAYNGLMGNIPNEIGNCSSLEFLFLNNNRFSGQIPAEFGKLSLLRSLNICNNLLSGSLPEELGNLSSLVELVVFTNNFTGPLPHSIGNLKSLTTLRAGGNGLSGSLPSEIGGCTSMEFLGLAQNQIGGELPTEIGMLQNLRELLLWNNQLSGLIPKEIGNCTSLETLALYGNALVGYIPEEIGNLKSLGRLYLYRNKLNGTIPRTIGNLSLALEIDFSENSLMGDIPSEISKISGLQLLFLFENQLSGVIRYEFSSLRNLTRLDLSINNLTGSVPLGFQYLTQMTQLQLNDNSLTGNIPQSLGLYSPLWVVDFSDNELTGTIPPHLCRNSKLMLLSLASNRLYGNIPTGILNCETLALLLLVENSLTGGFPSQLCQLVNLTAVELNQNRFSGPISPDIGRCHKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNSFTGPIPPEIVRCKKLQRIDLSRNSFTGSLPDELGTLSQLEILKVSDNKLTGHIPPTLGNLLRLTALQMGGNLFSGEIPPDLGNLTSLQIALNLSNNNLTGSIPDKLGNLYMLESLLLNNNNLSGEIPSTFENLSSLMGCNFSYNNLSGPIPSIPLFQNMATSSFIGNNGLCGAPLLGCNINPSSLSHPPMNNVSSRTKIITIIATVIGGISLILIVFILYLMRRPPEPVSSLRDSEIPSSDSDIYFPPKDGFTFHDLLEATNNFHDGYVIGKGACGTVYKAVMPTGKTIAVKLLASNREGNNIDNSFQAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEYMARGSLGEQLHGFACNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKIIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGKTPVQPLEQGGDLVTWVKNYIRSHNNTLSSGVFDTRLNLQDQTTVNHMLTVLKIALLCTNMTPTDRPSMRQVALMLIESNEREGNLANISPSRYEDSTSKEDDEQKIEAVIKDMTSPAEPAGLVLSDLPDAESALGMIPLHGENGE 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0453 1151 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 774 885 - -
Acco04g0453 1151 SUPERFAMILY L domain-like 385 724 - -
Acco04g0453 1151 Gene3D Phosphorylase Kinase; domain 1 777 885 - -
Acco04g0453 1151 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 886 1097 - -
Acco04g0453 1151 ProSiteProfiles Protein kinase domain profile. 808 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0453 1151 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 412 725 - -
Acco04g0453 1151 SMART LRR_typ_2 653 676 IPR003591 -
Acco04g0453 1151 SMART LRR_typ_2 580 604 IPR003591 -
Acco04g0453 1151 SMART LRR_typ_2 148 172 IPR003591 -
Acco04g0453 1151 SMART LRR_typ_2 364 387 IPR003591 -
Acco04g0453 1151 SMART LRR_typ_2 388 412 IPR003591 -
Acco04g0453 1151 SMART LRR_typ_2 484 508 IPR003591 -
Acco04g0453 1151 SMART LRR_typ_2 292 316 IPR003591 -
Acco04g0453 1151 SMART LRR_typ_2 196 220 IPR003591 -
Acco04g0453 1151 SMART LRR_typ_2 244 268 IPR003591 -
Acco04g0453 1151 SMART LRR_typ_2 100 124 IPR003591 -
Acco04g0453 1151 SMART LRR_typ_2 532 556 IPR003591 -
Acco04g0453 1151 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 31 190 - -
Acco04g0453 1151 PANTHER UNNAMED PRODUCT 20 113 - -
Acco04g0453 1151 Gene3D Ribonuclease Inhibitor 284 386 IPR032675 -
Acco04g0453 1151 SUPERFAMILY L domain-like 34 334 - -
Acco04g0453 1151 SMART serkin_6 808 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0453 1151 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 284 388 - -
Acco04g0453 1151 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Acco04g0453 1151 SUPERFAMILY Protein kinase-like (PK-like) 783 1081 IPR011009 -
Acco04g0453 1151 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 191 283 - -
Acco04g0453 1151 Gene3D Transferase(Phosphotransferase) domain 1 886 1105 - -
Acco04g0453 1151 Gene3D Ribonuclease Inhibitor 387 728 IPR032675 -
Acco04g0453 1151 Gene3D Ribonuclease Inhibitor 183 283 IPR032675 -
Acco04g0453 1151 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Acco04g0453 1151 ProSitePatterns Serine/Threonine protein kinases active-site signature. 929 941 IPR008271 GO:0004672|GO:0006468
Acco04g0453 1151 Gene3D Ribonuclease Inhibitor 31 182 IPR032675 -
Acco04g0453 1151 Pfam Protein kinase domain 809 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0453 Acco-ChrAcco04 3445105 3451889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0453 54 1081 Receptor kinase-like Gene Family AT1G73080 37.639 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco04g0453 Pkinase 7.1e-48 CL0016