Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0452 ATGAGTCGAGGAGGTTCATCAAGATGGTGCCCAACACAGGAACAGCTAGTGATTCTTGAGGAGATGTACAGAGTTGGGATCAGAACTCCAAATGCGTCCCAGATTCAACACATCACAGCTCAGCTTTCTTTCTATGGCAAGATAGAGGGAAAGAACGTTTTCTATTGGTTTCAGAATCACAAGGCTAGGGACAGACAGAAACTCCGACGCAGATTGAACAAGCAACATCAGTTGCAGCAGCAGCACCACAACCACCAGCTCTGTAACTATTACCTTCACAACCATAATAATCACCATTATTCTCATCACTTCCCTATGGATCATCAGTCTCTTGTTACTGCCTCTTCATCTTCCCAGCAGCGTTCCTTTTACAACTCCCTTGCCTCGTTTCCACAGGGAGGAGCTGGAGAAGCATCAAAACAAGGCATGGATTACAAGTGGAAAATTGATAATACAGAAGAAGGAGGAGTGATGGAGAAGACAATAAAGCAAGATTGGAGGACGAAGACGATGATGGAAGTAAGTCCAGGTGCTTCAAATTGGCCTACAAGAACCCTCAAGACTCTTGAACTTTTCCCAATCAGGGACAGACTCAAACAAGTGTGA 606 0.4472 MSRGGSSRWCPTQEQLVILEEMYRVGIRTPNASQIQHITAQLSFYGKIEGKNVFYWFQNHKARDRQKLRRRLNKQHQLQQQHHNHQLCNYYLHNHNNHHYSHHFPMDHQSLVTASSSSQQRSFYNSLASFPQGGAGEASKQGMDYKWKIDNTEEGGVMEKTIKQDWRTKTMMEVSPGASNWPTRTLKTLELFPIRDRLKQV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0452 201 Gene3D - 6 77 - -
Acco04g0452 201 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Acco04g0452 201 CDD homeodomain 8 67 IPR001356 GO:0003677
Acco04g0452 201 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 196 IPR044555 GO:0003700|GO:0099402
Acco04g0452 201 FunFam WUSCHEL-related homeobox 4 6 73 - -
Acco04g0452 201 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Acco04g0452 201 SMART HOX_1 4 71 IPR001356 GO:0003677
Acco04g0452 201 Pfam Homeodomain 7 66 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0452 Acco-ChrAcco04 3440775 3441870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0452 1 194 Wox Gene Family AT2G28610 40.984 4.30e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco04g0452 Homeodomain 8.6e-18 CL0123