Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0450 ATGTGGATAAGATGGGGTTTAGACATGGAAGGGCTGGCCATGCTGAAGCAGCTCATCGGTCAGCTTCAGGAGTTCTTGGACCTCTACGGCTCTCACCTTCCTCTACCTTCGTCTTCTTCTTCTTCTTCTTCTTCCATTTTTCTACCTTCCCAGCAATTCTTTCTCTCGCAGCCTCTCTTCCTTTACCAACGCCGCAGGGACGGGAGTTGGGTGGAGCTGAGAGACCGGAAGGGCTATCCATACTGTCGACGGCTGCTCTGTTCTTCTTGTGAGTCGACGTTCTTGATTGGACCAGAGGAAGAGGGAAGTCGAATCCCATTTGCTATTATAAATTCCGGACAAGGGTGCAGTGAAAGAATTGGTTATATCAGACTATGGGAACAGAATGCCCAAAAAGAAACCCTTTATGATGTTCTTAATGTGAAGGAAGATGCAAGCTACGAAGAGATTCGTGCCAGTTACCGCAGTGCTATACTCAATTTACATCCTGATAAATTATTGAAGACATCTGATCAGATGTCAAGCACTCATCAAACTTCAGGAGACAGATTCCTCACTGTACAGAAGGCATGGGAAATTCTCAGCAATTCAACCTCTCGTACAGCATACGACAATGAGCTGCGTGGTTCAAGACAGGATGCACTGGTTGCAGATGTTGCAGAAGATGTAAGCTTGCAGGATATGATCGTTGAAGAAGCAATGGATCTCTCTTACCAGTGCAGGTGTGGTGATTACTTCTCCATAGACTCTACGGAATTGGAGAAAATGGGGTATTCATTGTTGAGGGATGGAAGTGAGATTTCTTTACGTACTGTTGATAGTTTGCCAGCTTCTGTTATTCTTCCATGTGGATCTTGTTCTCTGAAAGTTCGTCTACTAATCAACATTGATTGTAGCAATTGA 903 0.4474 MWIRWGLDMEGLAMLKQLIGQLQEFLDLYGSHLPLPSSSSSSSSSIFLPSQQFFLSQPLFLYQRRRDGSWVELRDRKGYPYCRRLLCSSCESTFLIGPEEEGSRIPFAIINSGQGCSERIGYIRLWEQNAQKETLYDVLNVKEDASYEEIRASYRSAILNLHPDKLLKTSDQMSSTHQTSGDRFLTVQKAWEILSNSTSRTAYDNELRGSRQDALVADVAEDVSLQDMIVEEAMDLSYQCRCGDYFSIDSTELEKMGYSLLRDGSEISLRTVDSLPASVILPCGSCSLKVRLLINIDCSN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0450 300 SMART dnaj_3 133 199 IPR001623 -
Acco04g0450 300 PRINTS DnaJ domain signature 179 199 IPR001623 -
Acco04g0450 300 PRINTS DnaJ domain signature 136 154 IPR001623 -
Acco04g0450 300 PRINTS DnaJ domain signature 154 169 IPR001623 -
Acco04g0450 300 Gene3D DnaJ domain 123 210 IPR036869 -
Acco04g0450 300 PANTHER DPH3 HOMOLOG-RELATED 134 295 IPR044248 GO:0017183|GO:0046872
Acco04g0450 300 Pfam DnaJ domain 135 204 IPR001623 -
Acco04g0450 300 Gene3D DPH Zinc finger 211 300 IPR036671 -
Acco04g0450 300 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 219 295 IPR007872 -
Acco04g0450 300 CDD DnaJ 134 196 IPR001623 -
Acco04g0450 300 SUPERFAMILY CSL zinc finger 220 296 IPR036671 -
Acco04g0450 300 ProSiteProfiles dnaJ domain profile. 134 207 IPR001623 -
Acco04g0450 300 FunFam DNAJ heat shock N-terminal domain-containing protein-like 212 298 - -
Acco04g0450 300 SUPERFAMILY Chaperone J-domain 128 208 IPR036869 -
Acco04g0450 300 Pfam CSL zinc finger 222 293 IPR007872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0450 Acco-ChrAcco04 3417853 3423303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0450 130 204 C2H2 Transcription Factor Family AT1G74250 37.333 6.75e-07 48.5