Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0446 ATGAGGCAAATCTTTGTGTTTTTCTTCTCTGTCACCACCACTCTCTTATGTTGTTGTACCCTTTCTTTCTCTTATAACCATGAAGCTTATCTGCTTTATTCATGGCTTCACAGCTCACCCTCTTCACCACCTTCTTCACATTTCTCTAACTGGAACATTAGTGACTCAAACCCATGTAACTGGACCTCCATAACTTGTTCTCCTCAAGGTTTTGTCACAGAAATTAATCTTGTCTCTGTCCCTCTTCACTTGCCTCTACCTTACAATCTCTCTTCCTTTCGCTTCCTTACCAAACTTGTCTTGTCAAATGCAAATCTCACCGGAAGTATCACTTCTGATATTGGTGCTTGTTCTCCCCTTACTGTCATTGATCTTAGCCATAATGGCCTCATTGGTTCTATTCCTTCGAGTGTTGGGAATTTGCCAAATCTCAAGACTTTGGCCTTAAACTCCAACTTCCTCAGTGGAGAAATCCCAAATGAGCTAAGTTATTGCATTGGCCTAGAATCTGTCATCCTTTCAAATAATCGGCTAAGTGGAAAAATCCCACCTTTGCTGGGAAAATTATCAAAACTTGAGATTTTTAGAGCAGGAAGGAACAGACTCATTACTGGGAATATACCACATGAGCTGGGAAATTGCACTAATTTGATTTCTTTGGGGTTGACTGAAACCAGCATATCAGGGTCTTTGCCTACTTCAATGGGTAGGCTTAGAAAGCTTCAAAGGTTGTCACTTTGTGATACTATGCTTTCTGGTGAGATTCCATCAGAGATCGGTAATTGCTCTGAGCTTGCTGAGTTGAGGCTATGCACAAATAAACTATCAGGTTATGTTCCATCTGATTTAGGCAAACTGCAAAAGCTGCAAATTTTGAATTTATGGGATAATTTTATTACTGGGGCTATTCCTGAAGAGATTGGTAACTGTACAAGCTTGACAACACTTGAGCTTTCAATGAATTCTCTATCTGGGACTATCCCTTTGTCTGTAGGTAAGCTTGTGAAGCTTGAAAAGTTTTTGGTTGCTCAAAACAATATCTCTGGTTTTGTACCTTCAACTCTTTCAAATGCCTCAAACCTGCAAAGATTGGAACTTTACATGAACCAAATATCAGGGTTGATCCCACCTGAGCTTGGGAGATTGCAAAAGCTCACTCAGTTCTATGCTTGGGGTAACCAGCTTGAAGGAACCATACCTTCTACTTTAGCCGACCTCAGTAACCTCCAAAAGCTTGATTTGTCTTGGAACTCATTTATTGGAAGCATTCCAAAAGGCCTGTTTTTGCTACAAAACCTCAGAGAGTTTGAGTTAATTTTCACTGATATATCAGGTGCAATTCCACCTGAGATGGGAAGTTGCAGCTCTCTTGAAAGGCTGAGTCTAAGAAACAATAGAATTTATGGTGAGATTCCAAAGACAATTTGTGGTTTAAAAAACTTAATCTTTTGTGATATCTCCAATAACCGCCTTATTGGGTCATTGCCGGAGGAGATTGGTGGTTGCTCTAAGCTGGAAATGATAAACCTTAGCAACAATGACTTAGAAGGTCCACTTCCTGAGTCATTATCAACACTAGCCAATCTTTCAGTTTTGAATGCGTCTAATAATAAATTTGAAGGTCAAATACCTACAAGCTTAGGACATGATCTTTCTTCCCTAATTGATCTCCAACTTAGCAGAAACAAGTTATCTGGAACCATTCCTCAATCACTTGGTCTATGTTCAAAGCTCCAAATGCTTGATCTTAGTAGCAATGAACTCACTGGAAGCATACCAGAAGAGTTAGGAGACATAAAAACTCTTGCAGTTGTTCTTAACCTTAGTCACAACTCTCTTAAAGGACCAATTCCTTCTGAAATCTCTAAACTCAACATGCTCTCAGTGATTGACATTTCACATAACAATTTGGAAGGAACTTTGCAGCCTCTTTCTCACCTTGCAAGTCTAGTTTCTCTCAATATCTCTTACAATAACTTCACTGGCCATCTTCCTGACACTACAATTTTTAGACACTTGTCACCACAAGAAATTATAGGAAACAGGGGTCTCTGTTCTAGGATTCAAGATTCTTGCTTCTTAAATGGTTCACGCAGGAAACAATTGACTGAAAACATAAACTCAACCATTCTTAAACTGGTCATTGGGCTGCTGGTACTGTCGATAATGATATTTGTTGTTACAATAATCATTTCAGTTAACAGGGCAAGAACTAACAGAGACAATAATAATCATTCAGAGATGGGAAACACATGGACATGGCAATTCACTCCATTTCAGAGGTTAAATTTCTCAGTTGAGCAGGTGCTTAGAAGCTTAAAAGACGAAAACATAATAGGAAAAGGAAGCTCAGGAGTTGTTCATCGTGTCGATATTGGCAATAATGAAGCCATAGCCGTGAAGAAATTGTGGCCAGCTCCAATGGCTTCTAGTGTTATTGGAGGAGCCAACGATGACAAGAGAGGAGCACGCAACTCTTTCTCGAGAGAGCTGAAAATCCTCGGCTTAATCCGACATAGGAACATTGTGAAACTCCTAGGATGTTGTTGGAGTGACAACATGAGAATGCTTATGTATGAATACATGACAAATGGGAGCTTAGGAAGTCTACTTCATGAGAGGGATGGGAATTCTTGTTTGGAATGGGAAGTTAGGTACAAAATCTTGTTAGGTGCTGCACAAGGCCTTGAATATCTTCACCATGATAGTGAACCTCCAATAGTCCACAGAGACATCAAACCTAGTAACATCCTTATTGGTCCTGAATTTGATGCTTGCGTTGCTGATTTTGGCTTGGCTAAGTTTGTTGACGATTGTGGTTTCGGCAAGTCATCCAATATAGTTGCTGGTTCTTGGGGATATATCGCACCTGAATATGGCTACATGATGAAGATCACAGAGAAGAGTGATGTTTATAGTTTTGGAGTAGTGATGCTGGAAGTGCTGACAGGTAAGAAACCGATTGATCCAAGCATACAAGAAGGGTTACACATTGCAGAATGGGTGAGAGAAAAGAGGGGACAAGTATCAGAAGTCCTAGACCCAGCATTACTAGTTGCAGCAGAATCAGAAATAGAAGAAATGAAGGAAGCAATAGGGATTGCCCTATTGTGCTTAAGTTATGCCCCAAATCAAAGACCTACAATGAGGGATGTGGCAAGCATGATCAAGGAAATTAAGCAAGTAAGTGAGGCTGAATATGCAGATTTTGATACCCTCTTAAAGGACTCTCCTTCACCATTTACTGGGCCTTCTGCTGCACAATCTTCAAATAATTCACCTGCAACACCAAGCTTGTACCTTAAAAGCAACAAACCCAGCCCCTCCGCATGCTCTCCAAGACTTTCATCTTTTTCCATTGTTGAATTGGGTTAA 3375 0.4018 MRQIFVFFFSVTTTLLCCCTLSFSYNHEAYLLYSWLHSSPSSPPSSHFSNWNISDSNPCNWTSITCSPQGFVTEINLVSVPLHLPLPYNLSSFRFLTKLVLSNANLTGSITSDIGACSPLTVIDLSHNGLIGSIPSSVGNLPNLKTLALNSNFLSGEIPNELSYCIGLESVILSNNRLSGKIPPLLGKLSKLEIFRAGRNRLITGNIPHELGNCTNLISLGLTETSISGSLPTSMGRLRKLQRLSLCDTMLSGEIPSEIGNCSELAELRLCTNKLSGYVPSDLGKLQKLQILNLWDNFITGAIPEEIGNCTSLTTLELSMNSLSGTIPLSVGKLVKLEKFLVAQNNISGFVPSTLSNASNLQRLELYMNQISGLIPPELGRLQKLTQFYAWGNQLEGTIPSTLADLSNLQKLDLSWNSFIGSIPKGLFLLQNLREFELIFTDISGAIPPEMGSCSSLERLSLRNNRIYGEIPKTICGLKNLIFCDISNNRLIGSLPEEIGGCSKLEMINLSNNDLEGPLPESLSTLANLSVLNASNNKFEGQIPTSLGHDLSSLIDLQLSRNKLSGTIPQSLGLCSKLQMLDLSSNELTGSIPEELGDIKTLAVVLNLSHNSLKGPIPSEISKLNMLSVIDISHNNLEGTLQPLSHLASLVSLNISYNNFTGHLPDTTIFRHLSPQEIIGNRGLCSRIQDSCFLNGSRRKQLTENINSTILKLVIGLLVLSIMIFVVTIIISVNRARTNRDNNNHSEMGNTWTWQFTPFQRLNFSVEQVLRSLKDENIIGKGSSGVVHRVDIGNNEAIAVKKLWPAPMASSVIGGANDDKRGARNSFSRELKILGLIRHRNIVKLLGCCWSDNMRMLMYEYMTNGSLGSLLHERDGNSCLEWEVRYKILLGAAQGLEYLHHDSEPPIVHRDIKPSNILIGPEFDACVADFGLAKFVDDCGFGKSSNIVAGSWGYIAPEYGYMMKITEKSDVYSFGVVMLEVLTGKKPIDPSIQEGLHIAEWVREKRGQVSEVLDPALLVAAESEIEEMKEAIGIALLCLSYAPNQRPTMRDVASMIKEIKQVSEAEYADFDTLLKDSPSPFTGPSAAQSSNNSPATPSLYLKSNKPSPSACSPRLSSFSIVELG 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0446 1124 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 862 1074 - -
Acco04g0446 1124 Pfam Leucine Rich Repeat 408 426 IPR001611 GO:0005515
Acco04g0446 1124 CDD STKc_IRAK 779 1059 - -
Acco04g0446 1124 Pfam Leucine rich repeat N-terminal domain 38 67 IPR013210 -
Acco04g0446 1124 FunFam LRR receptor-like serine/threonine-protein kinase 531 600 - -
Acco04g0446 1124 SUPERFAMILY RNI-like 99 469 - -
Acco04g0446 1124 Gene3D Phosphorylase Kinase; domain 1 749 861 - -
Acco04g0446 1124 SUPERFAMILY Protein kinase-like (PK-like) 746 1056 IPR011009 -
Acco04g0446 1124 Gene3D Ribonuclease Inhibitor 22 84 IPR032675 -
Acco04g0446 1124 SUPERFAMILY L domain-like 375 707 - -
Acco04g0446 1124 Pfam Protein kinase domain 775 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0446 1124 FunFam Putative LRR receptor-like serine/threonine-protein kinase 605 690 - -
Acco04g0446 1124 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 336 1057 - -
Acco04g0446 1124 ProSiteProfiles Leucine-rich repeat profile. 408 430 IPR001611 GO:0005515
Acco04g0446 1124 ProSitePatterns Protein kinases ATP-binding region signature. 779 802 IPR017441 GO:0005524
Acco04g0446 1124 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 201 424 - -
Acco04g0446 1124 ProSiteProfiles Protein kinase domain profile. 773 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0446 1124 SMART LRR_typ_2 551 575 IPR003591 -
Acco04g0446 1124 SMART LRR_typ_2 647 672 IPR003591 -
Acco04g0446 1124 SMART LRR_typ_2 526 550 IPR003591 -
Acco04g0446 1124 SMART LRR_typ_2 334 357 IPR003591 -
Acco04g0446 1124 SMART LRR_typ_2 238 262 IPR003591 -
Acco04g0446 1124 SMART LRR_typ_2 286 310 IPR003591 -
Acco04g0446 1124 SMART LRR_typ_2 406 430 IPR003591 -
Acco04g0446 1124 SMART LRR_typ_2 454 478 IPR003591 -
Acco04g0446 1124 SMART LRR_typ_2 141 165 IPR003591 -
Acco04g0446 1124 Gene3D Ribonuclease Inhibitor 86 235 IPR032675 -
Acco04g0446 1124 Gene3D Ribonuclease Inhibitor 407 694 IPR032675 -
Acco04g0446 1124 Gene3D Ribonuclease Inhibitor 237 406 IPR032675 -
Acco04g0446 1124 FunFam Nuclear pore complex protein NUP107 25 183 - -
Acco04g0446 1124 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 425 519 - -
Acco04g0446 1124 Gene3D Transferase(Phosphotransferase) domain 1 862 1075 - -
Acco04g0446 1124 MobiDBLite consensus disorder prediction 1078 1115 - -
Acco04g0446 1124 Pfam Leucine rich repeat 528 588 IPR001611 GO:0005515
Acco04g0446 1124 SMART serkin_6 773 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0446 1124 ProSitePatterns Serine/Threonine protein kinases active-site signature. 907 919 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0446 Acco-ChrAcco04 3397506 3401425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0446 23 1081 Receptor kinase-like Gene Family AT5G56040 43.256 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco04g0446 Pkinase 1e-40 CL0016