Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0438 ATGGGTGGGACGAATGGAGCGGAGAATCTCATTGCTGACTTCCGTCATCAGCTAAGCTTGGAGACACAAATGGAGCTAAGAGCTCAAATTCGTGTTGAGGTGACTGTGCTTACTAGCTATAATAAATCTGCCACCATGAATAGTGAGGCTCCAGGCACTCCAGACCAGTGGCTTAAAGGTTCAAATGATAGAATCCTTTCAGACAGCAATGAAGACAATATCTGTTCGCAGACAGGTGAAGAATTTTCAACTGAATTCTATCGGGATCGGTTTGGTTCAAGGAGACTTAATGTTGTTGGCCTAAGGAGAATAGATTCCGATAGTAACTCGGATTTGTCAGACGCGGGTGCAACGGCAGGACATGTTGCTGAGCCTGAAAGCAGGGCATATCCTAACAATTTGGACAAGTTCCAGTGGGAACATGGTGGTATTGGACAACGATCTGGTAAATTTACTGAAGAAGTTTATTTGGAAGCAAGTTCTTCAGGACCAACTGCTCCACCCGTTTATGCAGCTGAATCCCCTCAGTCGTGTCATCCTTATCCATCAGCACTTTCAGATGCTTCGTTTTATAAGAAGATAAAATTTCTTTGTAGCTTTGGAGGGAGAATATTACCGAGGCCAAATGATGGGAAGCTCAGATATGTGGGAGGAGAAACACGGATTATATCCATAAGGAAAAACATTACTTGGGAGCAACTTATGGAGAAGACTCATGCAATATGGAACCAAACTCACATTATCAAATACCAGCTTCCCGGTGAGGATCTGGATGCTCTTATTTCTGTTTGTTCTGATGAAGATCTTCATCATATGATAGAGGAGTATGAAGAACTTGAAAGAATTGAAGGCTCTCAACGATTGCGGATATTTCTCATATCTTCAAGTGAAACTGAAAGCCCGAACTCTATTGAAGCAAAAGTCAATCTGCCAGGTGATGTTGACTATCAGTATGTCGTTGCTGTTAATGGCATGCCGGAACCAAGTTCTCGGAAGATCTCTGATTTCAATAGTCCAAGATTGTTTAAGGAATCAACTGCATTTGCTTGGGATGTGAAGGATCGAGGTCCAATGTCCCCACGTTTGGGAAGATTGCTCAATAAAGCTGGTTCTCAGCTTTTAATTGCACCTCCAGTGCAAGGCAAATCATTCATGCAATCACCACCTAGTCCTTTATCTCTTATTCGTGCTCAGACTAAAGATAATCAAATTTCCAACGTAGAGCTAATTATGGATCAACCTTGCAATGTTGGTAATGAAGGCCTTGTTCCCTTTGTGAAGGAAAGAATTCAATGTGGCAATTCCTCGTATAGAGATGATGCCCATTATGTTGATCCAGCTGCATACTATAACAATCTAGCCCAAGGGCCTCCCTTTCTGAATTATCATCATAATAATCAACATATGGTGCACGTTGATCAGCCTGAGAATCTCACTGGTGGTGTTCAATATCAGATGAGAAGTCACAGTGAAAACTTTGTCTCTTCTGCAACGTGTGGTCAAGGTGATATGATATTTGAGAGACCCCCACGTCCAAATGAGGGTGCATTCCATTATGAGAATGATCTCTCTCATCCTGAAGGGTCATCATTAGTATTTTCAGTCCCTAATGATCGAGATAGGTCTCATTACAAATTGTCGCATGCATTTTCTGATTCAATGTTGCAGAGTGATGAGAGGTTTGAAGATCATTTGCAGCCCTCCCTTAAAGTAAAGGGAAACAAGTTACCTTTACTGCAAGTTTCAAATTCTTTCCGGGAAAACCCATTACAGGAGGGAGAGGTAATTGATGAAAAAAACCTGGTTACTGAGCTTCAAATTCTGCCCAGTTTTGGAACGACTGGCAGTTTCAAGGGGATTTTGAATCCCAGTCAAGGGAGCTTGCAACTCGCAGATGATAACAATGCCTATTCTGGTGAAATTGGAAGATATGGAGGTAATATTGAAGTACCATCACATGAAAATGTCTTGCATATCAAAGATCTGGAGAGCATCAATTACAAACAAGTTGGTTGCCAGTCTCCAGCAGAGTTAAGTAGTGAATGCAAATTACCTGCTTCCTCATTAAAGTCTGAATCTACGAGAAACCTGAGTGAGCAACCACATGGTCTACTAGTAGACATGGCTTCTTCTGAGTTTTTTATGAGAAGCCAAAAGTCTATGATGTATCAGCAATTTACTATGTCAACAACAGATTACAGCGAGGCATCTCACCTTGGATCCTCTGATTTACAGCTTATTGACTCCCAAACTGACATAGAGTCCATACTGCGAGCCTCTAATAAGGGATCAGCTTCCAGAGGGGAGATTTTTCTCTCTGATGAGAATCCTGCCACTTATTCTCACCAGAAGAATGACAAGATTGTCCATGACCAAGATCCTTTTGTTGGGTCTAACATTGAGTTGTATGACCAGTCACAGAGCTGTGTTACTTGCCGAGAAATCAAGCAGCCAAATGCAGCAGGTATTGTTAAAAGGCCAACTGATAGTAGCTTTTCAGGTGTGGATGGAGATGAAGAGGACGAATCTGAAGCTGTGTCTCCTAACAGGGAAGAGTTTGCAAAAGTTGATAGTGCAAACTTCAACAAGTCAATTGGATCAGCAACTGCTGAAATAGATGCTGAACTCTATGGTTTGCAGATTATTAAGAATGCTGATATTGAAGAATTGCAAGAGCTAGGATCAGGAACATTTGGAACTGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCAATCAAGAGGATAAAAAGTAGTTGTTTTTCAGGCAGATTACCAGAGCAAGAGCGTTTGACAAGAGATTTCTGGCGAGAGGCAAAAATTCTGTCAACTCTACACCATCCAAATGTGGTGGCCTTTTACGGGATAGTTCCAGATGGACCTGGTGGGACAATGGCAACTCTAACAGAATATATGGTACATGGATCACTGAGGAATGTCCTCTTGAAGAAGGAAAAAGTGCTTGACCGCCGAAAGCGGCTTATGATTGCATTGGATGCAGCCTTTGGCATGGAATATTTGCATTTTAAGAAAATTGTTCATTTCGATTTGAAGTGTGATAATTTACTTGTCAATTTGGGGGATCCTGACCGGCCTGTGTGCAAGGTTTCTGATTTTGGCCTATCAAGAATTAAGCGCAACACACTTGTTTCTGGTGGTGTCAGAGGAACTCTTCCCTGGATGGCACCAGAATTATTAGATGGCAACAGAAGTGGGGTCTCTGAAAAGGTTGATGTTTTCTCATTTGGCATTACAATGTGGGAGATCTTGACTGGGGAAGAGCCATATGCTAGCATGCACTGTGGTGCCATAATAGGTGGAATTGTAAACAATACACTAAGGCCTCTAATCCCAAAACGGTGTGATTCTGAATGGAAGAGGCTGATGGAAGAATGCTGGAGCCCTGATCCTGCAGCCAGGCCATCCTTCACTGAAATAACACACAGACTTCGCCTCATGCAAGCGGCTCTGCCCAAGAAGAAACAAAATCCTGCAACTTTATGA 3504 0.4227 MGGTNGAENLIADFRHQLSLETQMELRAQIRVEVTVLTSYNKSATMNSEAPGTPDQWLKGSNDRILSDSNEDNICSQTGEEFSTEFYRDRFGSRRLNVVGLRRIDSDSNSDLSDAGATAGHVAEPESRAYPNNLDKFQWEHGGIGQRSGKFTEEVYLEASSSGPTAPPVYAAESPQSCHPYPSALSDASFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNITWEQLMEKTHAIWNQTHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERIEGSQRLRIFLISSSETESPNSIEAKVNLPGDVDYQYVVAVNGMPEPSSRKISDFNSPRLFKESTAFAWDVKDRGPMSPRLGRLLNKAGSQLLIAPPVQGKSFMQSPPSPLSLIRAQTKDNQISNVELIMDQPCNVGNEGLVPFVKERIQCGNSSYRDDAHYVDPAAYYNNLAQGPPFLNYHHNNQHMVHVDQPENLTGGVQYQMRSHSENFVSSATCGQGDMIFERPPRPNEGAFHYENDLSHPEGSSLVFSVPNDRDRSHYKLSHAFSDSMLQSDERFEDHLQPSLKVKGNKLPLLQVSNSFRENPLQEGEVIDEKNLVTELQILPSFGTTGSFKGILNPSQGSLQLADDNNAYSGEIGRYGGNIEVPSHENVLHIKDLESINYKQVGCQSPAELSSECKLPASSLKSESTRNLSEQPHGLLVDMASSEFFMRSQKSMMYQQFTMSTTDYSEASHLGSSDLQLIDSQTDIESILRASNKGSASRGEIFLSDENPATYSHQKNDKIVHDQDPFVGSNIELYDQSQSCVTCREIKQPNAAGIVKRPTDSSFSGVDGDEEDESEAVSPNREEFAKVDSANFNKSIGSATAEIDAELYGLQIIKNADIEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLPEQERLTRDFWREAKILSTLHHPNVVAFYGIVPDGPGGTMATLTEYMVHGSLRNVLLKKEKVLDRRKRLMIALDAAFGMEYLHFKKIVHFDLKCDNLLVNLGDPDRPVCKVSDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNRSGVSEKVDVFSFGITMWEILTGEEPYASMHCGAIIGGIVNNTLRPLIPKRCDSEWKRLMEECWSPDPAARPSFTEITHRLRLMQAALPKKKQNPATL 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0438 1167 CDD PB1_UP2 197 293 - -
Acco04g0438 1167 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 213 295 - -
Acco04g0438 1167 SUPERFAMILY CAD & PB1 domains 209 299 - -
Acco04g0438 1167 Pfam PB1 domain 209 292 IPR000270 GO:0005515
Acco04g0438 1167 Gene3D - 212 295 - -
Acco04g0438 1167 ProSitePatterns Protein kinases ATP-binding region signature. 893 914 IPR017441 GO:0005524
Acco04g0438 1167 Pfam Protein tyrosine and serine/threonine kinase 889 1150 IPR001245 GO:0004672|GO:0006468
Acco04g0438 1167 ProSiteProfiles Protein kinase domain profile. 887 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0438 1167 PRINTS Tyrosine kinase catalytic domain signature 1121 1143 IPR001245 GO:0004672|GO:0006468
Acco04g0438 1167 PRINTS Tyrosine kinase catalytic domain signature 969 982 IPR001245 GO:0004672|GO:0006468
Acco04g0438 1167 PRINTS Tyrosine kinase catalytic domain signature 1006 1024 IPR001245 GO:0004672|GO:0006468
Acco04g0438 1167 PRINTS Tyrosine kinase catalytic domain signature 1077 1099 IPR001245 GO:0004672|GO:0006468
Acco04g0438 1167 MobiDBLite consensus disorder prediction 107 127 - -
Acco04g0438 1167 SMART serkin_6 887 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0438 1167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1012 1024 IPR008271 GO:0004672|GO:0006468
Acco04g0438 1167 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 880 974 - -
Acco04g0438 1167 SMART PB1_new 208 295 IPR000270 GO:0005515
Acco04g0438 1167 Gene3D Phosphorylase Kinase; domain 1 880 974 - -
Acco04g0438 1167 MobiDBLite consensus disorder prediction 824 850 - -
Acco04g0438 1167 CDD STKc_MAP3K-like 893 1150 - -
Acco04g0438 1167 PANTHER SERINE-THREONINE PROTEIN KINASE 260 1151 - -
Acco04g0438 1167 Gene3D Transferase(Phosphotransferase) domain 1 975 1166 - -
Acco04g0438 1167 SUPERFAMILY Protein kinase-like (PK-like) 876 1150 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0438 Acco-ChrAcco04 3319475 3326098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0438 77 325 MAP Kinase Kinase Kinase AT1G16270 43.478 7.78e-44 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Acco04g0438 PK_Tyr_Ser-Thr 1.1e-61 CL0016