Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0426 ATGGACATGGATATGGACATTCCACTTCTAGAAGAGCTGGAATTGCTGGAATCCAATGCCCGTCTTCTAGAAGACTACCCAGACCTGGAGCCACCGGAACCCTACCCGTACGAAGGCCAAGAAGCGCCACCAGCAGCACAACCACCATCATCTCCAGATCTCCAGTTCGACTCTGAAATCCAAGTCATCGGCCAAAAGCGGTCGAGGTCGGTTAGTCCGAATGGATCACTTTCAGAGGCTGCGGAGCTGTCAGAGGAGAAAAGGTGCAGGACTGACGAGTCGGCACGGGCGACTGATGAGGACCGGCTTCGTTACTCGCCACCCAAGGGTAGCGAGTCTGTAGTGGCAGAACAAGCGAGCTTTGTGAGGGAGAAGATGTTATCCAGGTATGCATCGGAAATCGATGGAGAGTGTATACCGATCACTGCACCCAACGGCGACAGGATTTATGCGAGGCTAGATAGGTTGGAAGGGGAGGAACGGCTGAAGAATCTAGATGTGAGAGCAAATTGTGATGGTCTTATATCAGAACCCATTAATATTCTGTTTGAGAAATTGGATCAAGAGGCTTTCACTAAGACATTGGAAGCTAGTTCTGAATGCCAAAATGTTCCAGATGTTCCTGAAACACCAATTGTCCGTGAGCAACTTTGGGTGGATAAATATACCCCAAATTCGTTTACTGAGCTTCTTAGTGATGAACATACAAATCGTGAGGTACTCCTCTGGTTGAAGCAATGGGACTCTAGTGTATTTGGATCTGAGATTTGCAGTACCTCAGATGAAGTTTTGTCTGCCTTGAAACGACATTCTACTGTTGTCCAAAATCAGAAATCTTTAGATTCAAAATTTCAAAGAACGATTGGAGGCTCCAGATGGAGTAACAATAGATATAGAAATTCTGAAAGCATGGGTGAAAGCGGTAATTCAAAGAGCTTTCAGGATATATTGACCAGGAAAGTAAAGCATACTGGTCCACCAGAACAGAAGATCCTTTTGCTTTGTGGTCCTCCGGGTCTTGGAAAAACCACACTTGCACATGTAGCTGCTAGACATTGTGGATATCACGTGGTGGAGGTTAATGCTAGTGATGATCGTAGTACATCGACGATCGAGTCTAAGATCCTTAACGTGGTTGAGATGAACTCTATCATGTCTGATTCAAGACCACAGTGCCTGGTGATGGATGAAATTGATGGGGCACTATCCGATGGAAAGGGTGCTGTGGAGGTTCTTTTAAAGATGGTTTCTGTTGAAAAGAAGTCTGACGCGGGAAAGGAAAACATGGTGAAAGAGCTATCAGGAAGGAAATCCTCAAAAAAGGGACATAAGAAAGCATCACTGTCTAGACCTGTAATTTGCATTTGCAATGACCTATATGCCCCCGCCTTGAGACCATTGCGTCAAGTAGCGAAGGTTCACATTTTTGTTCAACCAACAGTTAGTCGTGTGGTAAGCAGGCTCAAATATATATGTAACAAAGAGGGGATGAAAGCTAATGCAATTGCACTTACTGCCCTAGCAGAATATACAGAATGTGATATACGATCATGCTTAAATACCCTCCAATTTCTCAATAAGAAGAAAGAAGCTGTCAATGTGTTTGATATTGGTTCTCAAGTGGTTGGCCGGAAAGACATGTCAAAGAATGTTCTGGACGTTTGGAAGGAGGTTTTTCAAAGGAAAAAAACAAAGGCAGAAAGAAAATCTCACAATAGCAAGCCTTTTGAAGTTAACTCCTTGTACTCCCTTGTATCAAGCCGTGGTGATTATGACTTGATTCTTGATGGAATTCATGAAAACATTTTACAGCTCAATTATCATGACCCAGTGATGCAGAAAACTGTCAAGTGCTTGAATAGTCTTGGAGTTTCTGATCTACAGCATCAATATATCATGCGTACACAACAATATCCCCTTCAGGTTTATTTGCCACCTGCGGCAATTACTGTACATCAACTGGTAGCTCAAATTCAGAAGCCAAACATCGAATGGCCAAGGTCCTACCAAAGGCATCGAACAATGATGGCAGAAAAGATGGACATTTTGAATACTTGGCATCACAAAATTCCACCATATATCGCTAGGAACTTATCAGCTAGTTCCTTTGTAGACGACTTAATTTCTCCATTATTACATATTCTGTCCCCTCCGACTATAAAACCGGTGGCATTACAATTACTGTCTGAGAAAGAGAAACATGATATTGCTCAATTAGTTAGCACAATGGTATCTTACTCTGTAACATATAAAAACATGAAATCAGATATAGTGCCTAATAGCTTGAGACATGAAGTAGCTGATCACTTGACATTATCATTTGATCCCCCAATTTGTGACTTCATCAATTTTAAGGATTATACCTCAAATCATTATGTGCTTGCTCCAGCCGTCAAGCAGATTCTTGTGCATGAGGTTGAAAAGCAAAAGATCTTGCAAGTTAGTATTGATAGGCCCTTAGGAAATGGAAGTAGCAGTGAAAGACCTGAATTCATTAAGGCTGGAACTAGCGATGCCCAATCATCCAAAATCAACCAAGCAGACACAGTTTCTGTTAAAAACGTTCAAAACGAAAGTAATGTCACAAAAGGAAGGAAAAATAATGCCAATGCCACCATAGTTTCACAGAATTCGCATCCTAGTAAAGGGGCATCGGACAAGATGAAATTTCAAAACACAGGAAGAATGAGAATGCCGTCCAGCGGTTCCTTCTTTGACAGGTTTAGAAAGTTGAATGATAAAGGTTTCCAAAGTGATGGTAGAACTGAACAGAAAGAAGCAACCTTGGAGAAAGCTCTACACCCATTACTGTTCAAATTTAACGAGGGCTTTACGAACGCAGTCAAGAGGCCTGTTCGTATTCGTGAATTTCTATTGTTGGTTCACTGCCCACGGAATACGGAGAACAAAAAAGCAGTTTGCATTCCAATCGTAGTCCTGAATATGATCTCAAAGCCACAGGAGCCGATTAGGGTCTTTGGCCAGCGATCAATCGATTCAACATTCCGTAAATTCCCTTCTGATTCTTCAACTATTTCCAACGATCTTAAAGGCAATGAGGGAAAACAAACTTCACACAAGAGCACCCCTGTCTCGCTTTCAGACTTCCTCGACCGCAAGTTGAAGAAATCTTCTCTAGTTCTCGGAAGAATTCAGGGGAAACCGACGCCCTTTTTATCTCCTCTGGGTTTAGAAATATCCGGAGTTAAGAATTTTAGGACCAACGAAAAAGTTGATAAAGAGACAAAGAGTATCAGTGATAGAGTGATTTTTGAGAAATTCAAGCATAATGATGAAGAAAAGGGAGATTTCATCGGTCCAAATGGTGTTAATGAGACAGAAAATTCAGTCAAAGATGATATGCAAGACTCAAGGAAAAGAAAGAATCCATTTCTAGGACTGAATGAGAACCAGACTGTTAGAAGGCAAGTGGTAATTCTTGGAGGTGAATCAACCAGAAGGCAAATGAGAAGAACTACTGCTCGTTCTTCAAGCAACAAAAGGCCCCCACCGCTTTACAATCACTATAAAAATGGCTGTGGATGGTGGGACTGTGAGATGGAAGGTGTTGACAACGAGGAAATGGGCTTCCGTGAAGTATGGGAAGGGGTGGGGTCCACCTCACTTGGAGAGATAGCTCATTGGCATTGA 3651 0.4229 MDMDMDIPLLEELELLESNARLLEDYPDLEPPEPYPYEGQEAPPAAQPPSSPDLQFDSEIQVIGQKRSRSVSPNGSLSEAAELSEEKRCRTDESARATDEDRLRYSPPKGSESVVAEQASFVREKMLSRYASEIDGECIPITAPNGDRIYARLDRLEGEERLKNLDVRANCDGLISEPINILFEKLDQEAFTKTLEASSECQNVPDVPETPIVREQLWVDKYTPNSFTELLSDEHTNREVLLWLKQWDSSVFGSEICSTSDEVLSALKRHSTVVQNQKSLDSKFQRTIGGSRWSNNRYRNSESMGESGNSKSFQDILTRKVKHTGPPEQKILLLCGPPGLGKTTLAHVAARHCGYHVVEVNASDDRSTSTIESKILNVVEMNSIMSDSRPQCLVMDEIDGALSDGKGAVEVLLKMVSVEKKSDAGKENMVKELSGRKSSKKGHKKASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVSRLKYICNKEGMKANAIALTALAEYTECDIRSCLNTLQFLNKKKEAVNVFDIGSQVVGRKDMSKNVLDVWKEVFQRKKTKAERKSHNSKPFEVNSLYSLVSSRGDYDLILDGIHENILQLNYHDPVMQKTVKCLNSLGVSDLQHQYIMRTQQYPLQVYLPPAAITVHQLVAQIQKPNIEWPRSYQRHRTMMAEKMDILNTWHHKIPPYIARNLSASSFVDDLISPLLHILSPPTIKPVALQLLSEKEKHDIAQLVSTMVSYSVTYKNMKSDIVPNSLRHEVADHLTLSFDPPICDFINFKDYTSNHYVLAPAVKQILVHEVEKQKILQVSIDRPLGNGSSSERPEFIKAGTSDAQSSKINQADTVSVKNVQNESNVTKGRKNNANATIVSQNSHPSKGASDKMKFQNTGRMRMPSSGSFFDRFRKLNDKGFQSDGRTEQKEATLEKALHPLLFKFNEGFTNAVKRPVRIREFLLLVHCPRNTENKKAVCIPIVVLNMISKPQEPIRVFGQRSIDSTFRKFPSDSSTISNDLKGNEGKQTSHKSTPVSLSDFLDRKLKKSSLVLGRIQGKPTPFLSPLGLEISGVKNFRTNEKVDKETKSISDRVIFEKFKHNDEEKGDFIGPNGVNETENSVKDDMQDSRKRKNPFLGLNENQTVRRQVVILGGESTRRQMRRTTARSSSNKRPPPLYNHYKNGCGWWDCEMEGVDNEEMGFREVWEGVGSTSLGEIAHWH 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0426 1216 CDD HLD_clamp_RFC 479 537 - -
Acco04g0426 1216 Gene3D - 479 549 - -
Acco04g0426 1216 MobiDBLite consensus disorder prediction 21 111 - -
Acco04g0426 1216 MobiDBLite consensus disorder prediction 29 50 - -
Acco04g0426 1216 SMART AAA_5 328 482 IPR003593 GO:0016887
Acco04g0426 1216 MobiDBLite consensus disorder prediction 81 107 - -
Acco04g0426 1216 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 3 959 - -
Acco04g0426 1216 Gene3D - 215 477 IPR027417 -
Acco04g0426 1216 MobiDBLite consensus disorder prediction 1006 1030 - -
Acco04g0426 1216 CDD AAA 314 417 - -
Acco04g0426 1216 FunFam Chromosome transmission fidelity protein 18 479 546 - -
Acco04g0426 1216 Pfam ATPase family associated with various cellular activities (AAA) 332 458 IPR003959 GO:0005524|GO:0016887
Acco04g0426 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 534 IPR027417 -
Acco04g0426 1216 MobiDBLite consensus disorder prediction 1101 1129 - -
Acco04g0426 1216 MobiDBLite consensus disorder prediction 51 79 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0426 329 537 Core DNA Replication Machinery Family AT5G22010 28.571 1.63e-14 76.6