Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0418 ATGAGTACTTCAGATGAAGAACGCTCTGTTATAGGAAGTAAGGCAGAAATAGGGTTTCTAGATTTTGAGGAAGAGAAATCTGTCTATAGTTATGCTCCAAATGAAGAGGACCCTATTGTCATTTCCGTCCCATTTCCGTTAGTGAATGAGAAACCACAATCAATATGTGTTGGCCAGACTTCTGTAGATGTAATAACGATCAAGAACACCACCAATGAACCGGTGGAACTATGGAGTGTTCATATATTTGCTTCAAGTCCTGAGGACTGTTTCACACTTTCTCTGATGGAACCTCCTTCAGAAAATTCAAATGTAGATAGCGTTCAAGGTTTTCTAGAGTCTTTCTCTCTGGAGGACAGGATGCTTCAACCTAATGAGGTTTTGAAGGTATGGTTATCTTGCAAAACAAAGGAAATGGGATTGCACACCACAATTGTGTATGTTGATGCAGGGGATGAACGAATAGAAAGGACGGTTTTTCTCTTAGCTGAAGACAAAATCTCCCAGTCTTTGGCCTCCAAAAAGCCTTATTCGAAAGGAAGGAAGAAAGAAAGATTTGTTGTAAATACTTTTGTTGCTGGCTCACGTCCTCAGAAGAAGGGCAATCGTGCATACACGAACAGGCTTCCAACATATGACATTCCCAAGGAAATAAGAGACATGCTGGAGAGCAATCAGATCCCTGATGCTATTGAAAGAGGTCTTACAAGGAGGAATTATGCTTCTTATTTCAAAACATTAGTTATGATGGAAGAGCTACAATTGGAGGAGGACATGAGGACCTATGATATGGAATGCGTAACTTTGAGGAAAAAGACGAGTCAATTCTTGTCATTGGAGGTTCCAGGGCTAGCTGAGAGAAGGCCGTCACTGGTTCATGGGGACTTCATTTTTGCCAAGTTAGCCCCTGAGCATGATAACATGCCTGTTTACCAGGGTTTTGTCCACCGTGTTGAGGCTGATGAAGTACATTTGAAGTTTGACCCTCAATTTCATTTTGCCCACAAAGAGGGTGATCTCTACAATGTTCACTTCGCATATAATAGGCTTAATATGAGACGGTTCTATCAGGCAATTGAGGCTGCAGAAAACCTAGGAAATGAATTCCTATTTCCGCATGAGACGTCTAGAAGGAGGTGCATTGAAATCTCTCATCTGGTGCCTATTTCTGGTAATATTAACGAGGAGCAGATGCTTGCGATCAAGAAGATTCTTGGATGCAAAGGTGCACCTCCTTATCTGATTCATGGTCCTCCAGGTACAGGAAAGACTAGTACAATAGTTGAAGCAGTCCTCCAACTCTACAAGAATCATAGGAAAGCTCACATTCTCATCTGTGCACCCTCAAATAGTGCTGCAGACTACCTACTTGAGAAACTCCTTGGTCAAAAGGCTGTCAAATTTCAAGATGAGGAAATATTCAGGCTTAATGCATCTACGAGGTCCTATGAGGAAATCAAACCTGAGCTTATGCGCTTCTGCTACTTTGATGAGTGTGTCTTCAAGTGTCCTCCAGCCAAAGCTCTCATGCAATTTAAGATCATAGTATCAACTTATATGAGTGTTAGTGTTATTTATGCTGAAAATGTCTTTCGAGGTCACTTTTCACACATTTTCTTGGATGAGGCTGGCCAGGCTTCAGAACCAGAAACCATGATCCCTATATCTCACCTCTGCAAAAGGGAGACTGTGGTCATTCTTGCTGGAGACCCAATGCAGTTGGGTCCGGTAATATATTCCAAGGAAGCAGAAAGCAATGGATCAGGGAAGTCATACTTGGAAAGATTGTTTGAATGTGACTTATATTCCTATGGAGATGATAATTATATAACCAGATTAGTTAGAAACTATAGGTGTCACCCACAAATATTACATCTCCCTTCCAAGCTGTTTTATGATGGAGAATTGATTGCGTGTAAGGATGATACTAGTTCTTTGTTGCTGAATGAAGACTTCCTCCCAAACAAGGAGTTCCCTGTTCTCTTCTTCGGCATCCAAGGATGTGATGAAAGAGAAGGGAGTAATCCATCATGGTTCAACCGAATTGAAGTGAGTAAGGTCATAGAGCTAGTCAAGAAGCTTGCAACCGGTGGAAATATGAAGGAGGAAGACATTGGGATTATAACACCATATAGGCAACAAGTACTTAAAATAAAGCAGACACTCGAAAGTATAGATTTGCCAGAGATTAAAGTTGGAAGTGTTGAGCAGTTTCAGGGACAGGAGAGACGAGTTATTATAATATCAACTGTTCGATCAACAATCAAACATAATGACTTTGACAGATTACACTGTTTGGGATTCCTGAGCAATCATCGAAGATTCAATGTTGCTATAACCCGTGCCATATCACTGCTGATTATTATTGGGAACCCTCACATAATCTCTCGGGACTACTATTGGCACAAACTCTTGTGGCATTGTGTGGACAATTCATCTTATCTTGGTTGTTCTCTTCCTGAAAGACTGGAGATTCAGGAGGACGCTGGCTTCAAAAATTTTCAAGAAAACTCATTGCCCTCTGAAGATGTGGCATGCGGTCAAGAAGATTCACCACAATCTGATTCTGAGTTGCCTAAACCAGCTGGTACTGATGAAGCTGAATGGTCTGATGGTTGGAAGTAG 2625 0.4133 MSTSDEERSVIGSKAEIGFLDFEEEKSVYSYAPNEEDPIVISVPFPLVNEKPQSICVGQTSVDVITIKNTTNEPVELWSVHIFASSPEDCFTLSLMEPPSENSNVDSVQGFLESFSLEDRMLQPNEVLKVWLSCKTKEMGLHTTIVYVDAGDERIERTVFLLAEDKISQSLASKKPYSKGRKKERFVVNTFVAGSRPQKKGNRAYTNRLPTYDIPKEIRDMLESNQIPDAIERGLTRRNYASYFKTLVMMEELQLEEDMRTYDMECVTLRKKTSQFLSLEVPGLAERRPSLVHGDFIFAKLAPEHDNMPVYQGFVHRVEADEVHLKFDPQFHFAHKEGDLYNVHFAYNRLNMRRFYQAIEAAENLGNEFLFPHETSRRRCIEISHLVPISGNINEEQMLAIKKILGCKGAPPYLIHGPPGTGKTSTIVEAVLQLYKNHRKAHILICAPSNSAADYLLEKLLGQKAVKFQDEEIFRLNASTRSYEEIKPELMRFCYFDECVFKCPPAKALMQFKIIVSTYMSVSVIYAENVFRGHFSHIFLDEAGQASEPETMIPISHLCKRETVVILAGDPMQLGPVIYSKEAESNGSGKSYLERLFECDLYSYGDDNYITRLVRNYRCHPQILHLPSKLFYDGELIACKDDTSSLLLNEDFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVIELVKKLATGGNMKEEDIGIITPYRQQVLKIKQTLESIDLPEIKVGSVEQFQGQERRVIIISTVRSTIKHNDFDRLHCLGFLSNHRRFNVAITRAISLLIIIGNPHIISRDYYWHKLLWHCVDNSSYLGCSLPERLEIQEDAGFKNFQENSLPSEDVACGQEDSPQSDSELPKPAGTDEAEWSDGWK 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0418 874 FunFam Probable RNA helicase SDE3 342 487 - -
Acco04g0418 874 FunFam Probable RNA helicase SDE3 618 817 - -
Acco04g0418 874 Gene3D - 618 821 IPR027417 -
Acco04g0418 874 Pfam AAA domain 590 792 IPR041679 -
Acco04g0418 874 Gene3D - 314 604 IPR027417 -
Acco04g0418 874 MobiDBLite consensus disorder prediction 842 874 - -
Acco04g0418 874 MobiDBLite consensus disorder prediction 842 858 - -
Acco04g0418 874 CDD SF1_C_Upf1 619 808 IPR047187 -
Acco04g0418 874 CDD DEXXQc_Helz-like 394 618 IPR026122 GO:0003723|GO:0032574
Acco04g0418 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 805 IPR027417 -
Acco04g0418 874 Pfam AAA domain 393 480 IPR041677 GO:0004386
Acco04g0418 874 Pfam AAA domain 507 581 IPR041677 GO:0004386
Acco04g0418 874 PANTHER CANCER/TESTIS ANTIGEN 55 118 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0418 Acco-ChrAcco04 3118392 3123509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0418 392 549 Core DNA Replication Machinery Family AT1G08840 34.783 7.10e-11 64.3