Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0383 ATGGATGGTTCTGCAAGTTCTGAGGCAGAGGACCCTGAGTTCGTTGAATTTGATCCGACTGGAAGATATGGAAGATATAACGAAATTCTTGGCAAAGGGGCTTCGAAGACAGTTTACAGAGCATTCGATGAGTATGAAGGGAGAGAAGTAGCATGGAATCAAGTGAAGCTCTACGATTTCCTGCAGAATCCTGAAGATCTTGAGAGATTATACTGTGAAATTCATCTTCTCAAGACCTTGAGACACAAAAGCATCATGAAGTTCTATACTTCCTGGGTTGATACTGCTAATAGGCATATTAACTTCGTCACTGAGATGTTCACCTCTGGCACTCTCAGACAGTACAGGATGAAACACAAAAAAGTTAACATTAGAGCTGTGAAGCATTGGTGCAGGCAGATTTTGGAAGGGCTCCTCTATCTTCACAGTCATGATCCTCCTGTGATTCACAGAGACCTCAAATGTGACAACATTTTCATCAATGGCAATCAAGGGGAAGTCAAAATAGGTGATCTTGGCCTCGCTGCGATTCTCCGCAAGTCTAACGCTGCAAGTTGCGTTGGCACACCAGAGTTTATGGCTCCGGAAGTGTATGAAGAGGATTACAATGAATTAGTTGATATATACTCTTTTGGAATGTGTATCTTGGAGATGGTGACATTTGAATATCCTTACAGTGAATGTACCCATCCTGCTCAAATCTACAAGAAAGTTGTCTCTGGAAAGAAACCAGAGTCTCTCTACAAAGTAAAGGATCCCGAGGTTAGACAATTTGTAGAGAAATGCTTAGCAACCGTGTCCCTTAGGCTTTCTGCAAAAGAACTTCTGAAAAACCCTTTTCTCCAAATCGATGATTACGGGTCTGACATGAGATCACTTTGGTATCAAGGAGATTGCTATGAAGTAACCCCTTTATATAGACAACCTCTTAATGGAGTTCACAGCTGTAACAACTCAATCAATGAGTACACTGATTATCTCAGTGGTTATGGACCAGAATCTGAGCTAACCAGCGAAATTGATCTCTTTGAAAGTGAAGAAGATGATAATTTGGCTGAAGCTGATACTGTAATCAAAGGCAGGAGAAGAGAAGATGATGGCATTTTTCTCAGACTTAGAATAGCAGATAAGGAAGGTCGAGTTCGAAACATCTACTTCCCATTTGACATAGAGACCGATACAGCATTGAGTGTTGCAAATGAAATGGTGGCTGAGCTGGACATAACTGACCAAGATATAACAAAAATAGCAGACATGATAGATGATGAAATAGCAAACTTGGTCCCAGAGTGGAAAACTGGACCCAGAATTGAGGAAAATCCAGAGTGCACAAGTGGAAGTCTCTGCTTCAATTGTGCTTCTTGTGGCACCTTCTTTGAGCAGGTATCACCAAACAGCCCATCAGCTAAGAAGCTACAATTTCTTCATTGTTCCAGAGATGGCTGCGCAGCCATTCATGGTCGTTTCGAGGAGATCACATACCAAGTTGAGGGGTCTGAAAATTGTACTACAGATGGTCCTCCAGCTGCTTCAAGTCAATCTACTGGTATTCACTTTACTGATATCTGGGCTCAAAGAGATGAGCCAGAACCAAGTTCAGAGGATTTCAGAGATATACATGGTGATAAATCACATGAGGCATCAAACAAATCAAAAGTTGAAGAGGATGAGAGAAGTATTATTATTGGGGATGATCAAAGTAATCCCAACTCAAAAGACACATTTTCTAATCAAGAATTAGAATGTGTTTTCCTGGACTATGAGAATGAAATTAGGCAAGAACTGAGATGGCTTAAAGCAAAGTACCAAATGCAGTTAAGGGAGCTAAGAGACCAGCAATTAGGTGGAACACCAAAACTTGCAAGCACTTCTCCTGATCCTGAAGAATCAGATGAGCAAAGGAAATATGGTGGGATCCCAAAGGTAGCAGTAACAGCTCACTTGAAGTTACGGAACAATAAACCATTATTGAGGCTTTTAACCACCTGGAAGCGATTTTCGGCTGATGCAGAGAAGAAAAAGTTCTCAGCTATGGCTAATATGGTGCAAGATATGGATGAGACTAGTGCAGCTAATAGTCCTGAGCAGATGTTCACAGCTAACGATTTCTATGCTGGATCTTTGCTTCCACACTCGCTTCATAGAGCGACCTCTCTTCCAGTTGATGCTATAGATGCATAG 2181 0.4145 MDGSASSEAEDPEFVEFDPTGRYGRYNEILGKGASKTVYRAFDEYEGREVAWNQVKLYDFLQNPEDLERLYCEIHLLKTLRHKSIMKFYTSWVDTANRHINFVTEMFTSGTLRQYRMKHKKVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAASCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPESLYKVKDPEVRQFVEKCLATVSLRLSAKELLKNPFLQIDDYGSDMRSLWYQGDCYEVTPLYRQPLNGVHSCNNSINEYTDYLSGYGPESELTSEIDLFESEEDDNLAEADTVIKGRRREDDGIFLRLRIADKEGRVRNIYFPFDIETDTALSVANEMVAELDITDQDITKIADMIDDEIANLVPEWKTGPRIEENPECTSGSLCFNCASCGTFFEQVSPNSPSAKKLQFLHCSRDGCAAIHGRFEEITYQVEGSENCTTDGPPAASSQSTGIHFTDIWAQRDEPEPSSEDFRDIHGDKSHEASNKSKVEEDERSIIIGDDQSNPNSKDTFSNQELECVFLDYENEIRQELRWLKAKYQMQLRELRDQQLGGTPKLASTSPDPEESDEQRKYGGIPKVAVTAHLKLRNNKPLLRLLTTWKRFSADAEKKKFSAMANMVQDMDETSAANSPEQMFTANDFYAGSLLPHSLHRATSLPVDAIDA 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0383 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Acco04g0383 726 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0383 726 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Acco04g0383 726 MobiDBLite consensus disorder prediction 613 635 - -
Acco04g0383 726 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0383 726 FunFam probable serine/threonine-protein kinase WNK9 366 450 - -
Acco04g0383 726 CDD STKc_WNK 22 281 - -
Acco04g0383 726 Gene3D Phosphorylase Kinase; domain 1 7 105 - -
Acco04g0383 726 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Acco04g0383 726 MobiDBLite consensus disorder prediction 527 574 - -
Acco04g0383 726 Gene3D - 367 447 - -
Acco04g0383 726 Coils Coil 592 612 - -
Acco04g0383 726 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0383 726 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 369 424 IPR024678 GO:0004674|GO:0005524
Acco04g0383 726 FunFam Probable serine/threonine-protein kinase WNK1 8 105 - -
Acco04g0383 726 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 630 - -
Acco04g0383 726 MobiDBLite consensus disorder prediction 527 562 - -
Acco04g0383 726 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0383 Acco-ChrAcco04 2970018 2972936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0383 1 492 MAP Kinase Kinase Kinase AT3G22420 59.057 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Acco04g0383 Pkinase 2.8e-50 CL0016