Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0378 ATGTTGCAATCTCACATTTCTCTTGCTGCAAACTATCATCAAGGATTTGATGCGGTCCCGCACCTTCTGACACTCTCCTTCACCAGCTTCTGTTGCTTTTACTCCCCTCTCGTGACCCTCTTTCCTCCATCTCTTGTCACATATTTTGCTTCACCAAGAATGGCCGAAGCTTCATACACTGTGGCATCTGACAGTGAAACCATTGGGGAGGATAAGTCATCAGCTTTTCCTGAAATCGCCATTGGAATGGACATAGGTACATCACAATGTAGTGTTGCTGTGTGGAATGGATCTGATGTGGAGCTTTTGAAGAACACAAGAAACCAGAAGATTATGAGATCATATGTGACTTTTAAAGATGACACCCCTTCTGGAGGAGTTAGCAGTCAACTCTCTCAAGAACATGACTTGTTATCTGGAGCTACAATCTTTAACATGAAACGCTTGATTGGAAGAGTTGATACAGACCCAGTTGTCCACTCCAGTAAAAATCTCCCTTTTCTGGTACAGACCTTGGATATTGGTGTGCGTCCTTTCATTGCAGCATTAGTGAACAATATGTGGAGATCCACCACGCCGGAAGAAGTCTTGGCTATATTTCTTGTGGAACTAAGGGTAATGGCTGAAGCTCAGCTGAAACGACCAATAAGAAACGTTGTCCTCACAGTTCCGGTTTCATTCAGTCGATTCCAACTGACCCGCATAGAACGAGCTTGTGCTATGGCTGGCCTTCATGTTCTCCGGCTAATGCCTGAACCAACCGCTGTGGCTCTATTATATGGCCAGCAGCAGCAACAGAGTTCCCATGATAATATGGGCAGTGGAAGTGAGAAGATTGCTTTAATTTTCAATATGGGTGCTGGCTATTGTGATGTTGCTGTGACTGCTACTGCTGGAGGAGTATCACAAATAAAGGCCTTGGCAGGAAGTACCATCGGGGGAGAAGACTTGCTTCAGAATATGATGCATTATCTGTTACCGGAATCTCAAACTCTATTCAAGACCCGTGGTATCAAAGAAATCAAATCTATGGCCTTGCTCCGAGTTGCAACTGAAGACGCCATCCATTGGCTCTCCTCTCAAACCAGTGTGCATATTGATGTAGACTTGGGAGATGGTTTGAAGATAAACAAGGTTATAAACCGGGACGAGTTTGAGGAAGTGAACAGAAAGGTTTTTGTGAAGTGTGAAAGCCTCATCATCCAGTGTTTGCAAGATGCCAAGGTAGAGGTTGAGGATGTAAACGATGTGATAGTCGTTGGTGGGTGCTCTTATATTCCGAAGGTGAAGAATCTTGTGGCTAGCATGTTTAATGGAAAGGAACTTTACAAAGGTGTGAATCCTCTGGAAGCTGCCGTTCGTGGTGCAGCAGTTGAGGGAGCTGTAGCATCAGGTATCAATGATCCCTTTGGAAACTTAGACTTGCTAACTATCCAAGCCACACCCCTAGCTATAGGGATAAGAGCTGATGGAAACAGCTTTGTCCCTGTGATACTAAGGAATACAACAATGCCAGCAAGGAGGGACTTGGTCTTCACAACCTGTCATGATGATCAAACTGAGGCTTTGATTATTGTGTATGAAGGTGAGGAAAAGAAGGCTGAAGAGAATCATTTGCTGGGATACTTCAAAATAGTAGGAATTCCTGAAGCACCCAAAGGAGTTCCGGAGATTAATGTGTGCATGGACATAGATGCTGCAAATGTACTGAGAGTGTTAGTGGGTGTTGTAATGCCAGGGTCTCGGCACCCGGCAATTCCGGTTATGGAAGTGAGGATGCCAACTGTTGATGATGGCCATGGTTGGTGCGTTGAGGCTTTAAATAGGAAGTGTGGTAATAAACAAGACTTAGTTACTGTCCAGAAGAAAGCATAA 1875 0.4453 MLQSHISLAANYHQGFDAVPHLLTLSFTSFCCFYSPLVTLFPPSLVTYFASPRMAEASYTVASDSETIGEDKSSAFPEIAIGMDIGTSQCSVAVWNGSDVELLKNTRNQKIMRSYVTFKDDTPSGGVSSQLSQEHDLLSGATIFNMKRLIGRVDTDPVVHSSKNLPFLVQTLDIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRVMAEAQLKRPIRNVVLTVPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYGQQQQQSSHDNMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMHYLLPESQTLFKTRGIKEIKSMALLRVATEDAIHWLSSQTSVHIDVDLGDGLKINKVINRDEFEEVNRKVFVKCESLIIQCLQDAKVEVEDVNDVIVVGGCSYIPKVKNLVASMFNGKELYKGVNPLEAAVRGAAVEGAVASGINDPFGNLDLLTIQATPLAIGIRADGNSFVPVILRNTTMPARRDLVFTTCHDDQTEALIIVYEGEEKKAEENHLLGYFKIVGIPEAPKGVPEINVCMDIDAANVLRVLVGVVMPGSRHPAIPVMEVRMPTVDDGHGWCVEALNRKCGNKQDLVTVQKKA 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0378 624 Gene3D - 265 443 - -
Acco04g0378 624 PANTHER HEAT SHOCK PROTEIN 70KDA 80 573 IPR013126 GO:0005524|GO:0140662
Acco04g0378 624 FunFam Heat shock 70 kDa protein 8 469 584 - -
Acco04g0378 624 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 471 584 IPR029047 -
Acco04g0378 624 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 476 580 IPR029047 -
Acco04g0378 624 Gene3D - 144 199 - -
Acco04g0378 624 PRINTS 70kDa heat shock protein signature 107 119 - -
Acco04g0378 624 PRINTS 70kDa heat shock protein signature 446 466 - -
Acco04g0378 624 PRINTS 70kDa heat shock protein signature 474 493 - -
Acco04g0378 624 PRINTS 70kDa heat shock protein signature 79 92 - -
Acco04g0378 624 PRINTS 70kDa heat shock protein signature 414 430 - -
Acco04g0378 624 PRINTS 70kDa heat shock protein signature 219 239 - -
Acco04g0378 624 PRINTS 70kDa heat shock protein signature 555 571 - -
Acco04g0378 624 SUPERFAMILY Actin-like ATPase domain 277 464 IPR043129 -
Acco04g0378 624 CDD HSP70_NBD 81 461 - -
Acco04g0378 624 FunFam Heat shock 70 kDa protein 8 314 395 - -
Acco04g0378 624 Pfam Hsp70 protein 80 572 IPR013126 GO:0005524|GO:0140662
Acco04g0378 624 SUPERFAMILY Actin-like ATPase domain 79 263 IPR043129 -
Acco04g0378 624 Gene3D Actin; Chain A, domain 4 314 395 - -
Acco04g0378 624 FunFam Heat shock 70 kDa protein 8 144 199 - -
Acco04g0378 624 Gene3D - 81 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0378 Acco-ChrAcco04 2923221 2926770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0378 80 572 Calmodulin-binding Proteins AT3G12580 38.767 3.59e-104 328