Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0376 ATGGATGTTCATGTTCCCACTAAACTCTTCCCACTCTGTGTACCCTTTTTCCTGTTTCTTCTATGCCCTAATGCTCAAAGTCAAACGAGCTCAAATTCTATCCAACCGGGTTCAAGCATCGTTGCTGGCTCTAATACGTCCTGGAAATCACCTTCTGCTGAATTCGCTTTTGGGTTCTATCCTGTCCTCAATGGTCGCTACCTTGTCGGTATTTGGTTCGATAAGATTATTCCCCACAAAACTCTGGTCTGGTCCTTCAATCGTGATGACCCAGCTCAGATTGGATCCACCATCAATCTCACGCAGAGTGGCCACTTTGTTCTGCATCATGCGAATGGTTCGTTAGTTTCAATCTACAATCAAACAAATAACGCTTCCTCTGCTTCAATGTTGGATAATGGAAACTTCGTCTTGAAAAACTCACTCTCAAACACCATCTGGCAGAGCTTTGCTTCACCAACAAATACCATTCTTCCAGGCCAAAATTTGGTCATGGGTCAGATTCTTTACTCCAATATGAATGAAACAATTGATTACTCCACCGGGAATTACAAGTTGGAAGTCCAAGCTTTTGATGGCAACATTGTGATGGCTACTATTAGGTATTCCGGTCATGCTTATTGGTTCACTGGAACAATCAACAACAATAATGTCAGCATTGTCTTTGACAAAAATACAGCTATGCTTTACGCCGTCAATGGCACCCGAAACATATACCAAATGACAACCGAAAACCAACTGCCTAATCCAACCAAAGATTACTACCATCGAGCAACCATCAACGATCATGGTAACTTCGAACAGTTGATTTTTCATAAAGAAGATGGAACAGAGTGGACGTCTATATGGAGAGCGATAACAGAGCCCTGTTTGGTGGATGGTATTTGTGGGGTGAATGGCTTTTGCACTTCACCTGACAACAAGGTGGTCATTTGTAGCTGCCTGCCTGGGTATTCACTTTTGGATCCTTATGTTCCCTCCAAAGGCTGTTATCCTGATTTAGTGGTGGATTTTTGCACTTCGAATTCATCTGATTCAGACTTTACTGTGCAAGAGATTTCTGATGCCGATATACACAACTTGAATTTTGCTGACATGCAATGGATACCTAATTCTGACTTGAATAGTTGCAAGAGAGAAGTGATGAATGATTGTTTTTGCATGGCTGCTGTTTTGATTGACACTAATTGTTTTAAGAAAAGGACACCTCTCTTGAATGGAAGAATAAGCATCCCAACCACCCTTAACAACATGGCGCTGGTTAAAGTTCCTGTGGTTCGCAAAGACGGTGGAAATGACTCACCTTCTTGGGTTGTTCTGCTTGTTTCATTCTTGTCTTGTTCCCTGCTCGCTCTTGTGTTTGCAGCTTCTGCTATTCATCATAACCCAAAGTTTCGCCGTTGGATACACAAGGAGCCGCCTCCCAAGCCAAAGCCGGTGGACATCAATCTCAAGACATTTTCATTCCAAGAGTTGAGGGAAGCAACAAAGGGCTTCAAGAACAAACTTGGGCGAGGCGCATTTGGTATTGTGTATGGTGGGATCTTGACGTTGGAGGGCGAACAGGTTGAGGTTGCCGTTAAACAACTGGAAAAAACAGAGGATGAAGATGAGATTCGTGAGAATGAGTTTGTGACAGAAGTTCAGGTCATTGGTCTGACTCATCACAGGAATCTTGTCAGGTTATTAGGCTTCTGCAATGAACAAAATCATCGTCTTCTAGTTTATGAGATGATGAAACATGGATCACTCTCCAGTTTCCTTTTCAGGGAAGGGGATATGCCTAGATGGGAAGATAGAGCAAAGATTGTGCTTCAAATAGCAAGAGGCTTGCTATATCTGCATGAAGAGTGTGATCCTCAAATAATTCATTGCGACATAAAGCCACAGAATGTTCTTCTTGACTCAACGTATACTGCAAAAATTTCTGATTTTGGGGTTGCAAAGTTGCTAAAGAAAGACAAATCTAGAACAAGCACCAACGTAAGGGGAACAATGGGATACATGGCTCCAGAATGGCTCAAGAATGCACCCATTACATCAAAGGTTGATGTTTATAGCTTTGGGGTGATGTTGTTAGAGACCATATTCTGCAGAAGGCACATAGAGCTACATCCAAGTCAAGATGGAGGAGACGGTGAAGACATGATACTAATTGATTTGGTTCTATATTTAGCAAAAGAAGGGAATTTGAGGGTGATGGTGGATCATGATCTTGAAATTTTGAATGATTTCAATAGGTTTGAGAGGATGACCATGGTTGGATTATGGTGCCTGTCTCCTAACCCAACCGTTCGACCGTCTATGAAGAAGGTGACACAGATGTTGGAAGGAACCATGGAGGTTGGTGTTCCTCCTTTGATTGATGCACAAATGTTTCAAGAATCTCTCATGGAGGAACAACTTAATTTGTAA 2415 0.4219 MDVHVPTKLFPLCVPFFLFLLCPNAQSQTSSNSIQPGSSIVAGSNTSWKSPSAEFAFGFYPVLNGRYLVGIWFDKIIPHKTLVWSFNRDDPAQIGSTINLTQSGHFVLHHANGSLVSIYNQTNNASSASMLDNGNFVLKNSLSNTIWQSFASPTNTILPGQNLVMGQILYSNMNETIDYSTGNYKLEVQAFDGNIVMATIRYSGHAYWFTGTINNNNVSIVFDKNTAMLYAVNGTRNIYQMTTENQLPNPTKDYYHRATINDHGNFEQLIFHKEDGTEWTSIWRAITEPCLVDGICGVNGFCTSPDNKVVICSCLPGYSLLDPYVPSKGCYPDLVVDFCTSNSSDSDFTVQEISDADIHNLNFADMQWIPNSDLNSCKREVMNDCFCMAAVLIDTNCFKKRTPLLNGRISIPTTLNNMALVKVPVVRKDGGNDSPSWVVLLVSFLSCSLLALVFAASAIHHNPKFRRWIHKEPPPKPKPVDINLKTFSFQELREATKGFKNKLGRGAFGIVYGGILTLEGEQVEVAVKQLEKTEDEDEIRENEFVTEVQVIGLTHHRNLVRLLGFCNEQNHRLLVYEMMKHGSLSSFLFREGDMPRWEDRAKIVLQIARGLLYLHEECDPQIIHCDIKPQNVLLDSTYTAKISDFGVAKLLKKDKSRTSTNVRGTMGYMAPEWLKNAPITSKVDVYSFGVMLLETIFCRRHIELHPSQDGGDGEDMILIDLVLYLAKEGNLRVMVDHDLEILNDFNRFERMTMVGLWCLSPNPTVRPSMKKVTQMLEGTMEVGVPPLIDAQMFQESLMEEQLNL 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0376 804 ProSiteProfiles Bulb-type lectin domain profile. 25 151 IPR001480 -
Acco04g0376 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Acco04g0376 804 CDD B_lectin 31 153 IPR001480 -
Acco04g0376 804 SUPERFAMILY Protein kinase-like (PK-like) 481 787 IPR011009 -
Acco04g0376 804 Gene3D Transferase(Phosphotransferase) domain 1 579 783 - -
Acco04g0376 804 ProSiteProfiles Protein kinase domain profile. 497 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0376 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 43 786 - -
Acco04g0376 804 PIRSF SRK 4 803 IPR024171 GO:0004674
Acco04g0376 804 Pfam Protein kinase domain 500 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0376 804 Pfam S-locus glycoprotein domain 251 319 IPR000858 GO:0048544
Acco04g0376 804 SMART blect_4 39 153 IPR001480 -
Acco04g0376 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 27 151 - -
Acco04g0376 804 Pfam D-mannose binding lectin 81 165 IPR001480 -
Acco04g0376 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 214 IPR036426 -
Acco04g0376 804 Gene3D - 153 289 - -
Acco04g0376 804 ProSitePatterns Protein kinases ATP-binding region signature. 503 528 IPR017441 GO:0005524
Acco04g0376 804 Gene3D - 25 152 IPR036426 -
Acco04g0376 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 784 - -
Acco04g0376 804 Gene3D Phosphorylase Kinase; domain 1 475 578 - -
Acco04g0376 804 SMART serkin_6 497 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0376 804 FunFam S-receptor-like serine/threonine-protein kinase 469 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0376 Acco-ChrAcco04 2915423 2917837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0376 485 786 Receptor kinase-like Gene Family AT3G53380 42.295 6.49e-68 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco04g0376 Pkinase 1.4e-52 CL0016