Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0375 ATGAAGGACTCAGAACCTCAGTTTCTTAAACATCTTCCCATCTTTTCCTGCTCTGCGCATGAATTCTCAATGGCTTCTTCGATATTCCTGACTTGTATTATTCTTGGGCTAGTTTCATTCTCAAGTGTCTTACATGCCCAGAATACTTCCTCCACAATAAATTTGAATCCCAACATCACTGCTGGTTCAAACTCTACTTGGAAATCTCCATCAGGAGATTTTGAATTTGGATTCTACCATCTTCCCGGAGATTACTTTCTGGTTGGAATATGGTTTGCGAAGATGATCCCTGAGAAAACTCTGGTTTGGTACTTTAACCCACCCGTGGAAGCTAATTCAGTAATCCAACTCTCTTCAGGAGGCCACCTTTTGCTCACATATCCAAACGGAACCTCTGTTCGAATAGACAGTGAAAATGCAGATAATGCAAGCTCAGCCTCCTTGGAGAACAATGGCAATTTGGTAATGAAAGACACCAATACAAGAGTTGTCTGGCAAAGTTTTGATTATCCCACTAACACAATGCTACCGGAGCAAATCTTAAAAGAGGACAACGCGCTTTATGCCAAAGGTAAAGGATCTCTCAACTACTCAAATGGAAACTTCAGGCTATTGATGCAGAACGATGGGAACTTGGTACTTTCTGCTTATCTATGGTCAGATCCTGCTTATTGGTACTCTAATACAGCATCAATAAAAAATGTAAGTTTGATATTCAATGATAGTGCTTTCTTGTACCTTACTAATGGTTCCACCAACATACATTCTGTGACTAATAACCCTCCAACCCCAATTGGAGATTTTTATCACCGGGCAACAATAGATGAAAATGGAAACTTTCACCAATATGCTTATAATAGAAGAAATAGCAGTGGCTGGATTAGGATCTGGAGTGCCATTGATGACCCTTGTAGAGTGGATGCTATTTGTGGAGTGAATGCCTTGTGCACTTCAACTTCACCTGACAATGAATCAGTGCAGTGTGAATGTCTTCAAGATTTTGTCCCATTTAATACAACAAACATATCCTTAGGATGTCGCCCAGAAACTTTGATTAATTATTGTGAACAAGACCCTTTAAGGTTGAACTTCAAACTAGAGGTTCTTGATGATACTGATTTTCAGTTTGGTCCCGAATCAGACTTTGCTGTGTTAGAATCTGCAGATTTAGATGCCTGTAAGAAATATGTCATGGATGATTGTAATATCGTTGCTGCCACCTTCAATGCTACATCTTCAAAATGTGTCAAGAAGAGGATGCCATTGGTGAATGCCAGAAAGAGTTCATCTTCTAAGGGCCAAAAAGCTCTTCTTAAGGTTCCTTATTACAACAATAATGCAATTGGAAGACTACAAGGTTCAAAAAAGAAGAGTTTCAATGTCAAAGTTTTTCTCAAGGTCATGTTTGCTGTTAGTTCCACCCTTGCTTGCTTGTTTGGAGCCCTTGCTGTCTATTACCATCCTTTACCTCGAAGATTAATGAGAAGAAACAAGATTCTAAATGCAAGTGCCATTGGAATCAACTTCAGAGAGTTCACATTTCAGGAGCTTCATGACGCAACAAGTGGGTTTAGTGACACTATTGGTAAAGGATCTTCAGGAAAAGTCTACAGTGGAAATCTTGCTATTGATGATGCAAGAATTGCTATTGCAGTGAAGATGCTGGATAAGAGATCTCTTGAAAGAATTGAAGAGGAGTTCATGATTGAGCTCAAGATAATTGGTCGCACTCATCATAAAAACTTAGTAAGACTTCTGGGTTTTTGCGTTGAGAAAAGCCATAGACTCCTTGTCTACGAGCTACTTCCAAATGGAGCACTGTCCAATTTTCTATTTGGACAACGAGAAAAACCTCTTTGGAGTCAGAGGATTGATATAGCTCTTGGAATTGCAAGGGGTTTACTTTACTTGCATGAAGAATGTGAGACCCAGATCATACATTGTGACATCAAACCCCAAAATGTGTTGCTAGATGCTAATTATACAGCAAAGATTGCGGATTTTGGGTTGTCCAAACTTCTCAACAAAGAGCAAACAAGAACTAACACTAAATTTAGAGGAACTATTGGTTACATAGCCCCTGAATGGCTAAGGAGTGCACCCATAACTTCTAAAGTTGATGTTTTTAGCTTTGGGATTATGTTGCATGAGATTATTTGCTGCAAAAGGCATGTCGAACAGAGTCAAGAAGCAGATGGAGAAAGTGATGAGGATGATCCAATCCTTTCAGAATGGGTTTTGAGGTGTATGGCGTCAAAGAAATTAGAGGAATTAGCAGGTCATGACTCGGAAGTACTGGGTGATATGAAGAGATTTGAGCAAATGGCGTTGGTTGGGCTATGGTGTATCCATCCAGATGCAGCACTGAGACCAACAATGAAGGAGGTGAATCAAATGCTTGAGGGAAACATAGTTGTTGGGGTCCCTCCTTTGCTTTATGAGCAAATGACAGCAGATCAGAGCCTTTAG 2469 0.3989 MKDSEPQFLKHLPIFSCSAHEFSMASSIFLTCIILGLVSFSSVLHAQNTSSTINLNPNITAGSNSTWKSPSGDFEFGFYHLPGDYFLVGIWFAKMIPEKTLVWYFNPPVEANSVIQLSSGGHLLLTYPNGTSVRIDSENADNASSASLENNGNLVMKDTNTRVVWQSFDYPTNTMLPEQILKEDNALYAKGKGSLNYSNGNFRLLMQNDGNLVLSAYLWSDPAYWYSNTASIKNVSLIFNDSAFLYLTNGSTNIHSVTNNPPTPIGDFYHRATIDENGNFHQYAYNRRNSSGWIRIWSAIDDPCRVDAICGVNALCTSTSPDNESVQCECLQDFVPFNTTNISLGCRPETLINYCEQDPLRLNFKLEVLDDTDFQFGPESDFAVLESADLDACKKYVMDDCNIVAATFNATSSKCVKKRMPLVNARKSSSSKGQKALLKVPYYNNNAIGRLQGSKKKSFNVKVFLKVMFAVSSTLACLFGALAVYYHPLPRRLMRRNKILNASAIGINFREFTFQELHDATSGFSDTIGKGSSGKVYSGNLAIDDARIAIAVKMLDKRSLERIEEEFMIELKIIGRTHHKNLVRLLGFCVEKSHRLLVYELLPNGALSNFLFGQREKPLWSQRIDIALGIARGLLYLHEECETQIIHCDIKPQNVLLDANYTAKIADFGLSKLLNKEQTRTNTKFRGTIGYIAPEWLRSAPITSKVDVFSFGIMLHEIICCKRHVEQSQEADGESDEDDPILSEWVLRCMASKKLEELAGHDSEVLGDMKRFEQMALVGLWCIHPDAALRPTMKEVNQMLEGNIVVGVPPLLYEQMTADQSL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0375 822 Gene3D Transferase(Phosphotransferase) domain 1 602 805 - -
Acco04g0375 822 Pfam Protein kinase domain 526 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0375 822 ProSiteProfiles Bulb-type lectin domain profile. 52 169 IPR001480 -
Acco04g0375 822 Pfam S-locus glycoprotein domain 268 336 IPR000858 GO:0048544
Acco04g0375 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Acco04g0375 822 ProSitePatterns Protein kinases ATP-binding region signature. 528 553 IPR017441 GO:0005524
Acco04g0375 822 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 54 810 - -
Acco04g0375 822 SMART blect_4 58 171 IPR001480 -
Acco04g0375 822 FunFam S-receptor-like serine/threonine-protein kinase 492 601 - -
Acco04g0375 822 SUPERFAMILY Protein kinase-like (PK-like) 509 809 IPR011009 -
Acco04g0375 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 185 289 IPR036426 -
Acco04g0375 822 Gene3D Phosphorylase Kinase; domain 1 497 601 - -
Acco04g0375 822 CDD STKc_IRAK 528 802 - -
Acco04g0375 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 807 - -
Acco04g0375 822 CDD B_lectin 62 171 IPR001480 -
Acco04g0375 822 PIRSF SRK 22 821 IPR024171 GO:0004674
Acco04g0375 822 Pfam D-mannose binding lectin 100 184 IPR001480 -
Acco04g0375 822 ProSiteProfiles Protein kinase domain profile. 522 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0375 822 Gene3D - 172 310 - -
Acco04g0375 822 Gene3D - 45 169 IPR036426 -
Acco04g0375 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 101 188 IPR036426 -
Acco04g0375 822 SMART serkin_6 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0375 Acco-ChrAcco04 2911252 2913720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0375 467 810 Receptor kinase-like Gene Family AT3G53380 39.080 1.68e-63 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco04g0375 Pkinase 6.6e-49 CL0016