Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0338 ATGACCATTGTAGACAGCATTGTCAGTCTCTTTCTTCTCATTATGCTCATTCTCATCATCGTCCTCGTCTTCTTTGCCTGTAAGCCATGGCGCTTTCTTTTCTCTTCCCGCTCCCGTTCTCGTTCCTCCATCAAGGCTAATGAAATTGAAAGGCCTCTTGTCTTAAATGATGTAAATTTGGAACATAACCCAATTAGTGAACTGCCTATAAATTATGATCTTGAGGGTCCATCCATCCTCAATGAAGGCCATTTTCACCCACCTCGACTCCCTGGACTTATTTATAAGCAAAGGCTTTCTACCGCTTCTTGCCATATGGCTCAAGATGTTATTTCTGATCCTTCAGAAGACGTTGCTGTTGGCCAGACACTCAAACTGTCTCCGGCCCAGTTGGCAGAGTTTCAGAAACATAATAAAAATTCTGAAACTGACAGACTGCAAGACTTTGTACAGAGAGATATATTAGATCAAAGAAGTTGTCTCACTCTAGAGGTGATTGCTGGTCCTTCTTGTGGACTTCGTTGTTCTGTACAATCAACAATTCCATCCAAGTTACCACTGACCCTGGGAAGAGTTTCTCCTAGTGATTTGTTAATAAAGGATTCAGAAGTGTCAGGAAAGCATTCACTAATAAACTGGAATTTGGAGAAAATGAAATGGGAGTTGGTAGATATGGGTAGCCTTAATGGAACACTTTTGAATTCTCAAACAATCAACCATTTAGACCCTGGAAGCAGGCAATGGAGTAATCCAACTGAGCTTGCTAATGGAGATATCATAACACTAGGAATGACAACGAAAGTAATTATTGACTATTGTGGTATTTTCTTTATTCCTTTGATAACCCAAGAAACAGAAAAACTATATCACTACACTGCTTTGGAGAAAGGAAGTAAGGGATTTATGTTCATATTACTTCTCAAAATAAGATTCACATTCCCTTTGGGGTTGGTCTGGCATCAGATCCCATGTCTAGGCGTCGAGGAGGGAAAAAGCTCACCATGGAAGACGTTTGCTATTATCAATGGCCTTTACCTGGATTGGATAAGGTTCTGGATTAATTTTGGACTGTTTGGCATTTGTGATGGGCATGGTGGAGATGGGGCCGCCAGATCTGCTAGCAAAGTTTTCCCTGAGATAGTTGCAAATATATTATCAGATTCACTAAAGAGAGAAAAGGTTGTATCAATCTGTGATGCTTCAAATGTTCTTAGAGATGCATTTTCTCAAACAGAAGCTTGCTTGAATCACTATTATGAGGGATGTACAGCAACAGTGCTTCTGGTTTGGGCTGATGACAATGAAAAGTTCTTTGCCCAATGTGCAAATGTTGGAGACTCTGCCTGTGTTATGAATGTTGATGGTAAAGAAATTAAGATGACGGAAGATCATAAGATAGCAAGTCATTCTGAAAGGCTACGAATAGAAGAGGCAGGCGAACCTCTGAGAGAAGGGGAAACACGTCTATATGGTATAAACCTCGCGAGGATGCTTGGAGACAAGTTTCTTAAACAGCAGGATTGTCGTTTCAGTTCGGAGCCTTATATAAGTGAAGTTGTGCACATTGATAAGGCGAGCAGGGCTTTTGCCATACTTGCAAGTGATGGCCTATGGGATGTTATGAGCGGGAAGAAAGCAATTCAGCTGGTGTTTCAGAAGAGTGATAAATACTCCACAGATGATGATGATAATTCAGCAGAAAAGATTGCAAATTTGTTGTTGAGTGAGGCGAGAACACTGAGAACAAAGGATAACACCTCAATAATTTTCTTAGATTTTGATACATTATCCAGATTTTCTTGTAAAGCTGAGTGTTAA 1818 0.4032 MTIVDSIVSLFLLIMLILIIVLVFFACKPWRFLFSSRSRSRSSIKANEIERPLVLNDVNLEHNPISELPINYDLEGPSILNEGHFHPPRLPGLIYKQRLSTASCHMAQDVISDPSEDVAVGQTLKLSPAQLAEFQKHNKNSETDRLQDFVQRDILDQRSCLTLEVIAGPSCGLRCSVQSTIPSKLPLTLGRVSPSDLLIKDSEVSGKHSLINWNLEKMKWELVDMGSLNGTLLNSQTINHLDPGSRQWSNPTELANGDIITLGMTTKVIIDYCGIFFIPLITQETEKLYHYTALEKGSKGFMFILLLKIRFTFPLGLVWHQIPCLGVEEGKSSPWKTFAIINGLYLDWIRFWINFGLFGICDGHGGDGAARSASKVFPEIVANILSDSLKREKVVSICDASNVLRDAFSQTEACLNHYYEGCTATVLLVWADDNEKFFAQCANVGDSACVMNVDGKEIKMTEDHKIASHSERLRIEEAGEPLREGETRLYGINLARMLGDKFLKQQDCRFSSEPYISEVVHIDKASRAFAILASDGLWDVMSGKKAIQLVFQKSDKYSTDDDDNSAEKIANLLLSEARTLRTKDNTSIIFLDFDTLSRFSCKAEC 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0338 605 ProSiteProfiles PPM-type phosphatase domain profile. 343 593 IPR001932 -
Acco04g0338 605 ProSitePatterns PPM-type phosphatase domain signature. 357 365 IPR000222 GO:0043169
Acco04g0338 605 SUPERFAMILY PP2C-like 350 594 IPR036457 -
Acco04g0338 605 ProSiteProfiles Forkhead-associated (FHA) domain profile. 187 238 IPR000253 GO:0005515
Acco04g0338 605 Gene3D - 156 275 - -
Acco04g0338 605 CDD FHA_PP2C70-like 161 268 - -
Acco04g0338 605 Pfam Protein phosphatase 2C 355 586 IPR001932 -
Acco04g0338 605 FunFam Protein phosphatase 2C 70 347 600 - -
Acco04g0338 605 Pfam FHA domain 188 263 IPR000253 GO:0005515
Acco04g0338 605 CDD PP2Cc 354 593 IPR001932 -
Acco04g0338 605 PANTHER PROTEIN PHOSPHATASE 2C 342 590 IPR015655 GO:0004722|GO:0006470
Acco04g0338 605 SMART PP2C_4 324 591 IPR001932 -
Acco04g0338 605 Gene3D - 347 602 IPR036457 -
Acco04g0338 605 SMART FHA_2 186 238 IPR000253 GO:0005515
Acco04g0338 605 SUPERFAMILY SMAD/FHA domain 159 270 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0338 Acco-ChrAcco04 2647143 2656188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0338 6 595 PP2C-type Phosphatase Gene Family AT5G19280 52.244 0.0 551