Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0336 ATGCAAGAGTTTCTGGGTTCTGTTCGCCGATCCTTGGTTTTCAGGAGCCCAGGCGGGGACGATGGAGGGTTTGGTGTTGGCGGTCTGGTCGATAAGATTGGCTCTAGTATTCGCAAATCACGAATTGGGCTCTTCTCTCAGCCACACGTTAGGGCTCTGCCGCCGGTTCCCAAGGACAACACTCCCTCGATCCGATGGCGGAAGGGCGATTGGATTGGTTCTGGTGCCTTTGGTACAGTCTACATGGGTATGAACCTTGATTCCGGGGAGCTTATTGCTGTCAAGCAGGTTTTAATCGCGGCAAGAAGTGCTTCGAAAGAGAAAACGCAGGTTCATATCATGGAACTTGAAGAAGAAGTGAAGCTTCTCAAGAATCTTAAACATCCAAATATTGTTAGATACTTGGGAACTGCTAGGGAGGAGGATTCCTTGAATATCCTGCTGGAATTTGTACCTGGAGGATCTATCTCATCACTCTTGGGGAAATTTGGATCCTTCCCTGAGTCTGTAATAAAAAAGTTTACAAAACAACTCTTACTGGGTCTTGAGTACCTTCACAAGAATGGAATTATTCACAGAGATATTAAGGGTGCAAACATTCTTGTTGACAATAAAGGATGCATTAAACTCGCAGACTTTGGTGCATCTAAGAAAGTTGTTGAGCTGGCTACCATGAACGGTGCAAAATCAATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTGCAGACAGGGCATAGCTTCTCTGCTGATATTTGGAGTGTGGGATGCACCGTGATAGAGATGGCAACAGGGAAGCCTCCATGGAGTGAACAGTTTCAGGAGGTTGCTGCTCTTTTCCATATCGGGACCACTAAATCCCATCCATCCATACCTGACCATCTTTCTGCCGAGGCAAAGGATTTTTTGTTAAAATGCTTGCAAAAGGAACCGGATCTAAGGCCTTCTGCATCAGATTTGTTACAGCATCCATTTGTCACCTGCGAGTATCAAGAATCTAATCCCACATTACGCAGTTCAGTTGTGGAATCTAGCAAGAAGATGGTGACATCTGGGACAGATTCTAAAATCTCGGGAATAGGTCTCAAGGATGTTTGTCAAATGGATAGCATAAGATGCTCATCTGTGTCTCCTGAGACTCTTTTAAAATCAGATTTCAATCGAGAAACAAGCAATTATGATGATGATATGTGTCAAATAGATGACAAAGATGATCTTTTTGTTGATGCATCAGCAAAATCTAAATCTCCCATTTCAGATGATATAAAGAGTTTTAACCCTATGTGTGAGCCTATGGATGAATGGCCATGCAATTTCGATAAAAGTCCAGATTTGGAGAGAAAGGGAACAAACTTGTCTCCTGATCAGACAATGAGAAGCACTGTAGCATCTCAAAAAGTGGAGAATGAATTTTCATTTCCAAGTGAGCCTATAGGAGCTGATGACGATGAAGAAGTTACTGAGTCAAAAATTAGAGATTTTCTAGATGAAAAGGCTCTGGAACTGAAGAAACTCCAAACTCCTCTTTATGAAGAATTCTTTAGCATATCGAACGCAGCTGTTCCTCCCATACCTGTTTCAATTGCGCACAGTGAAGTTGTTTCAGAAGTGTCAAATGTAACACCAAAAAGCAGGTCACCAAGTCAGGCTAGCAGACGATACTCAATGGCTGAGGGTGCTAATATTGCAAGGCATGGAAGTCATTATAAAAATCAATCTAAATTTAGTTGTGCAAATAGTCGGCCTTTGCAGGAAATCCACCCATCTGAGCTTAACGAATGGAAAGAGACACTTCAATATGCTAAGTTGGAATCATTTAGTGCTAGTCCAACTTTCTCAGAGATACAAAGGAAATGGAAGGAAGAACTTGTGGAAGAGCTTGAGAGGAAGAGAGAGATGATGCGTCTGTCAGGCTTAGGAGGGAAGATCACATCCCCAACTGATCGCAATCTTCGTAGACTGGCAGAGAGATCACGCTTTGCATTTCCAAGCTAG 2001 0.4288 MQEFLGSVRRSLVFRSPGGDDGGFGVGGLVDKIGSSIRKSRIGLFSQPHVRALPPVPKDNTPSIRWRKGDWIGSGAFGTVYMGMNLDSGELIAVKQVLIAARSASKEKTQVHIMELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKKFTKQLLLGLEYLHKNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATMNGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSEQFQEVAALFHIGTTKSHPSIPDHLSAEAKDFLLKCLQKEPDLRPSASDLLQHPFVTCEYQESNPTLRSSVVESSKKMVTSGTDSKISGIGLKDVCQMDSIRCSSVSPETLLKSDFNRETSNYDDDMCQIDDKDDLFVDASAKSKSPISDDIKSFNPMCEPMDEWPCNFDKSPDLERKGTNLSPDQTMRSTVASQKVENEFSFPSEPIGADDDEEVTESKIRDFLDEKALELKKLQTPLYEEFFSISNAAVPPIPVSIAHSEVVSEVSNVTPKSRSPSQASRRYSMAEGANIARHGSHYKNQSKFSCANSRPLQEIHPSELNEWKETLQYAKLESFSASPTFSEIQRKWKEELVEELERKREMMRLSGLGGKITSPTDRNLRRLAERSRFAFPS 666
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0336 666 FunFam Serine/threonine-protein kinase STE11 62 156 - -
Acco04g0336 666 SUPERFAMILY Protein kinase-like (PK-like) 65 329 IPR011009 -
Acco04g0336 666 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 347 - -
Acco04g0336 666 Coils Coil 106 126 - -
Acco04g0336 666 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0336 666 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0336 666 CDD STKc_MAPKKK 65 328 - -
Acco04g0336 666 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Acco04g0336 666 Pfam Protein kinase domain 68 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0336 666 Gene3D Transferase(Phosphotransferase) domain 1 65 360 - -
Acco04g0336 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Acco04g0336 666 FunFam Mitogen-activated protein kinase kinase kinase 2 65 356 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco04g0336 Acco-ChrAcco04 2613692 2618968 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0336 1 644 MAP Kinase Kinase Kinase AT3G06030 58.548 0.0 674
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco04g0336 Pkinase 1.5e-72 CL0016