Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0325 ATGATGAAGAAAAGCATGATCCAGAAACAACCATGTGCTGAGAATTTGAATGATGCATCAAGCAGCAGCACTGGTATCTCCTTAGATGACGGGGAGATTAACTGCACTAATGCAATATCTAAGCAGCAATATATTTTGGTGAAAAACTCTGCTTCTCATTGCTTGACCACCAGACTTGACCTGAATTATGCTCGTATGGCCATGGCAGAGATGGTGGGTACTTTCATTCTGATGTTCTGTGTGTGCGGGATCATTTCGAGCACGCAGTTGCAGAATGGACAAGTGGGCCTACTGGAGTATGCAGCTACAGCAGGATTAACCGTGGTTGTGGTGATCTTCTCAATAGGGCCAATCTCTTGTGCTCATGTTAACCCGGCCGCCACGATAGCTTTTGCAACATTTGGTCAATTTCCATGGCTGAAGGTTCCAGTTTACATACTAGCACAGATGGTGGGTTCTGTGTTGGCAACATATATTGGTAGCCTCGTGTATGGGATTAAATCAGATGTCATGATGACAAGGCCAATCCAAGGGGCTATGTCAGCCTTCTGGGTGGAGCTTATTGCAACTTTCATCATAATGTTCCTTGCTGCAGCCTTGACAAGTGAACTTCAAACAGTGGCTCATTTATCTGGTTTTGTTCTTGGAATAGCTATTGGACTAGCAGTGTTAATCACCGGAACTGTTTCAGGGGGATCAATGAATCCTGCAAGATCATTAGGGCCAGCAATAGTGTCATGGAAATTCAAGGACATATGGATATACATCACAGCCCCCATAATTGGAGCTGTAGCAGGCGTTCTCTTGTTTCGCTTTCTGCGTCTCAAACACCAACCAGGCACTGCTTTTTCCTCTCCAACCACAGCTGATCAAGACGCCCATTCCATAACCTTGTTCCCAGGTTAG 906 0.4525 MMKKSMIQKQPCAENLNDASSSSTGISLDDGEINCTNAISKQQYILVKNSASHCLTTRLDLNYARMAMAEMVGTFILMFCVCGIISSTQLQNGQVGLLEYAATAGLTVVVVIFSIGPISCAHVNPAATIAFATFGQFPWLKVPVYILAQMVGSVLATYIGSLVYGIKSDVMMTRPIQGAMSAFWVELIATFIIMFLAAALTSELQTVAHLSGFVLGIAIGLAVLITGTVSGGSMNPARSLGPAIVSWKFKDIWIYITAPIIGAVAGVLLFRFLRLKHQPGTAFSSPTTADQDAHSITLFPG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0325 301 SUPERFAMILY Aquaporin-like 61 279 IPR023271 -
Acco04g0325 301 Pfam Major intrinsic protein 63 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco04g0325 301 PRINTS Major intrinsic protein family signature 253 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco04g0325 301 PRINTS Major intrinsic protein family signature 141 160 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco04g0325 301 PRINTS Major intrinsic protein family signature 65 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco04g0325 301 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco04g0325 301 PRINTS Major intrinsic protein family signature 185 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco04g0325 301 PRINTS Major intrinsic protein family signature 104 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco04g0325 301 MobiDBLite consensus disorder prediction 10 24 - -
Acco04g0325 301 PANTHER AQUAPORIN NIP2-1 42 278 IPR034294 -
Acco04g0325 301 Gene3D Glycerol uptake facilitator protein. 28 282 IPR023271 -
Acco04g0325 301 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0325 Acco-ChrAcco04 2544736 2546328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0325 22 279 Major Intrinsic Protein MIP AT5G37820 35.849 1.06e-54 178