Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0317 ATGTCCCACATAACTGTGGAGAGGAACAGAAGAAGAAAGATGAATGAACATCTCAAAGTCTTAAGATCATTGACCCCACGTTTCTATATCAAGAGGGGAGATCAAGCATCTATAGTAGGGGGAGTGATAGAGTTCATAAAGGAGTTACACCAAGTTGTACAAGTGTTGGAATCCAAGAAAAGGAGGCGGGAGAGCGTGAGCCCTAGCCCTCGTGGTGGTGCTCCTATAACACTAGTTCATGATCTAGTTGTTGATAGTCCCTTTGGATCTGCCGATTCATTGAATAAGGAAATGGGAGGAGCAGTTAGGTGCAACTCTTCAGTTGCTGACGTGGAAGTCAAAATCGAAGGCCCCAATGTGATAGTGACAGTGATCTCTCACAGGATTCCAGGTCAGCTTGTCAAGATCATAGCAGTTTTAGAAAGGCTTTCTTTTCAAGTTCTTCATCTCAACATCAGTACCATGGACTACACAGTTCTTCACCACTTTGTTGTCAAGATAGGACTGGATTGTCAACTAAGCCTGGAGGAGCTAGCAATGGAAGTGCAACGCAGCTTCTCAGATGCTGTTACCAGTAGTACTGCACCAATTAAGCGCTTGATAATAGATTCCATTTAG 618 0.4385 MSHITVERNRRRKMNEHLKVLRSLTPRFYIKRGDQASIVGGVIEFIKELHQVVQVLESKKRRRESVSPSPRGGAPITLVHDLVVDSPFGSADSLNKEMGGAVRCNSSVADVEVKIEGPNVIVTVISHRIPGQLVKIIAVLERLSFQVLHLNISTMDYTVLHHFVVKIGLDCQLSLEELAMEVQRSFSDAVTSSTAPIKRLIIDSI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0317 205 PANTHER TRANSCRIPTION FACTOR FAMA 1 186 IPR044283 GO:0003700|GO:0010052
Acco04g0317 205 Gene3D - 1 65 IPR036638 GO:0046983
Acco04g0317 205 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Acco04g0317 205 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Acco04g0317 205 SMART finulus 4 55 IPR011598 GO:0046983
Acco04g0317 205 FunFam Transcription factor MUTE 1 67 - -
Acco04g0317 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 62 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0317 Acco-ChrAcco04 2509507 2511157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0317 1 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 61.429 1.04e-79 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco04g0317 HLH 3.4e-08 No_clan