Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0314 ATGGGAAATCTATGGAGTGGCAGAAGAAGAAACAATTACTTTCACTATCCACCTCCACCTCCACCTCCCCCTCATCTGCCACCTCCTTATTACTATTCCGCTGATTCCCATCTTCCTCCTCCGCCTCCGCCACCGCCACCTCAGCCGCAAGGCTATTATCTGACCAATTCTTACGGCAGCACGCCTCCTCTGCCACCGCCGCAGCCTCATCCTCACGCCCATTCATTCAGTCACTCAAATGGCCACAACTATTGCCCCAACTATGGCAATTCTATGACGGGTCGCTATCAGTACCAGCCTTATTATGTAAATCAGGGTACTGGTAATTGGCCTCCGATTCGTCCTCCTCTTGCTCCTGCCAATCTCCCACCGCGCTATGTCGATCATCAAACCGCCAAGACGGTCAAAAATGACGTCAATGTGCATAAAGATACTTTGCGGCTAGAGTTGGATGAGCACAATCTTGACCAGCACTTGGTTTCATTTGTTTTCGATGCCTTATATGATGGGAGCATTTCTATAATCTACTTTGCCAAGGAAGTGGAAACATGCAAGTTCATTCCACTTTTTCCTGAGATTGAACCAATCAAAATCCCTTTCCAGAAAGGAACCGGACAAAAGTTTTATCAGCCTTCAGGAACTGGCATTGACTTAGGCTTCTTTGAGTTGGATGATCTCTCAAAACCCTCACAAGAAGGAGACGTCTTTCCCCTTGTGGTATGTGCTGAAACATATTCAAGAACTCCTCCAGCGGATGAAAAATTTGGTGATTCAGTGGCTGATGTGTCACCTAACAGGCAGATAACTGAAGCTGTTATCGAGAAAAGCAATGGTAGTGGTTCTTTCCAGGTAAAAGTAATTAGGCAGATTTTGTGGATTGATGGAGATCGTTATGAATTAAGAGAGATATATGGAATTGGAGGCTCAGCAGCAGCAGATTTCAATGACAATGATCCTGAGACGGAGGAGTGTGTGATATGCATGACTGAACCAAAGGACACTGCTGTCTTACCTTGTTGTCATATGTGTATGTGCAGTGAGTGCGCCAAAGCTTTGAGGCTTCAATCAAATAAGTGCCCTATATGCCGTCAATCCATTGAAGAACTTATGGAGATCAAGATAAATAATGGTGATGTAAGTTTTCTTAGTTTTGTCCAAGTGACATTTGACAGAAGATCACTTGTCAAGTGTTATAAAGGGAAAAAGGCCACCTTGTTTGATCGCTGA 1227 0.4466 MGNLWSGRRRNNYFHYPPPPPPPPHLPPPYYYSADSHLPPPPPPPPPQPQGYYLTNSYGSTPPLPPPQPHPHAHSFSHSNGHNYCPNYGNSMTGRYQYQPYYVNQGTGNWPPIRPPLAPANLPPRYVDHQTAKTVKNDVNVHKDTLRLELDEHNLDQHLVSFVFDALYDGSISIIYFAKEVETCKFIPLFPEIEPIKIPFQKGTGQKFYQPSGTGIDLGFFELDDLSKPSQEGDVFPLVVCAETYSRTPPADEKFGDSVADVSPNRQITEAVIEKSNGSGSFQVKVIRQILWIDGDRYELREIYGIGGSAAADFNDNDPETEECVICMTEPKDTAVLPCCHMCMCSECAKALRLQSNKCPICRQSIEELMEIKINNGDVSFLSFVQVTFDRRSLVKCYKGKKATLFDR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0314 408 CDD mRING-HC-C3HC5_MGRN1-like 323 363 IPR045195 -
Acco04g0314 408 FunFam probable E3 ubiquitin-protein ligase LOG2 307 373 - -
Acco04g0314 408 SUPERFAMILY RING/U-box 317 370 - -
Acco04g0314 408 Pfam Zinc finger, C3HC4 type (RING finger) 321 368 - -
Acco04g0314 408 SMART ring_2 324 362 IPR001841 -
Acco04g0314 408 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 310 381 IPR013083 -
Acco04g0314 408 PANTHER MAHOGUNIN 1 373 IPR045194 GO:0061630
Acco04g0314 408 ProSiteProfiles Zinc finger RING-type profile. 324 363 IPR001841 -
Acco04g0314 408 MobiDBLite consensus disorder prediction 1 78 - -
Acco04g0314 408 MobiDBLite consensus disorder prediction 14 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0314 Acco-ChrAcco04 2477392 2481200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0314 94 378 C3H Transcription Factor Family AT3G06140 55.743 4.64e-101 303