Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0309 ATGAATATCGTCTCGCTTTCTGTCTGCCAACAAGTACGGCCCTCGGTCAATTTCCAAAGGTCGCTCCCCATGGACCCTTTGTTCGGCCACCTCCGTAAAGACAAGGTCGTTCTCATACTCGGCGCCACCGGCACCGGCAAGTCCAAGCTCGCCATCGACCTCGCCTCCTCCTTCCCTCCCGCCGAGATCGTTAATTCCGACAAAATGCAAGTCTACCAGGGCCTCGACATCACGACCAACAAGGTCACCGACGAAGAATGCCGCGGCGTCCCCCACCACCTCCTGGGAATCGCCGACCCTAACTCCAATTTCACCGCCGATGACTTCACCCGCCACGCCTCCGCCGCCATTGATTCCATCGTCCACCGTGGTTGCCTTCCCATCATCGCCGGGGGCTCCAATTCCTATATCGAAGCCCTCGTCGAAGACGACGCTGCGTTTCGGTTGAAGTACGAGTGTTGCTTTCTCTGGGTGGACGTTCCCCTGCACGCCCTTGATCCATTCCTCTCGAAGCGGATCGATCGGATGATCCAAGCGGCGTTGGATGAGATCCGTCAGTTTTTCGATCCGACCCGGGATTACACGACTGGAATCAGAAAAGCCATTGGAGTCCCTGAAGCTGATGAGTTTCTTCGAGCAGAGGCCACCGCCGATGAAGGGACCAAGAAGAGGTTACTAGAGGAAGCCATTGCCAAGATTAAAGCCAACAATTGCTCGCTGGCTCGTCGACAGCTTCAGAAGATTCATCGGCTTTACAACAAGTGGAAGCGAAACATGTATCGCCTCGACGCGACAGAGGTATTCAAAAAATCCGGCGACGAGGCAGAGCAACTATGGGAGACTCAAGTGCTTGCCAAGAGCCAGAGGATTGTACATAAGTTCCTCTACGACGACAGTCCGGAGGTTCAAGGCAGCCTCGGTAATGTCATCGGTGCCGCCGTATCCTCAGCCGAAGCAGGTGGCGATGGCCACCGCTAG 978 0.5583 MNIVSLSVCQQVRPSVNFQRSLPMDPLFGHLRKDKVVLILGATGTGKSKLAIDLASSFPPAEIVNSDKMQVYQGLDITTNKVTDEECRGVPHHLLGIADPNSNFTADDFTRHASAAIDSIVHRGCLPIIAGGSNSYIEALVEDDAAFRLKYECCFLWVDVPLHALDPFLSKRIDRMIQAALDEIRQFFDPTRDYTTGIRKAIGVPEADEFLRAEATADEGTKKRLLEEAIAKIKANNCSLARRQLQKIHRLYNKWKRNMYRLDATEVFKKSGDEAEQLWETQVLAKSQRIVHKFLYDDSPEVQGSLGNVIGAAVSSAEAGGDGHR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0309 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 145 IPR027417 -
Acco04g0309 325 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 295 IPR039657 -
Acco04g0309 325 Pfam IPP transferase 70 143 - -
Acco04g0309 325 Pfam IPP transferase 150 246 - -
Acco04g0309 325 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 259 - -
Acco04g0309 325 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 259 - -
Acco04g0309 325 Gene3D - 33 295 IPR027417 -
Acco04g0309 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 231 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0309 Acco-ChrAcco04 2438277 2439254 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0309 150 295 C2H2 Transcription Factor Family AT2G27760 30.460 1.96e-14 72.0