Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0306 ATGAATATCGTCTCGCTTTCTGTCTGCCAACAAGTACGGCCCTTAGTCAATTTCCAAATGGCACTCCCCATCGAACCTTTCTTCGGCCACCTCCGTAAAGACAAGGTCGTCGTCATACTCGGCGCCACCGGCACCGGCAAGTCCAAGCTCGCCATCGACCTCGCCTCCTCCTTCCCTCCCGCCGAGATTGTCAACTCCGACAAAATGCAAGTCTACCAGGGCCTCGACATCACCACCAACAAGGTCACCGACGAAGAATGCCGCGGCGTCCCTCACCACCTCCTGGGAATCACCGACGCTAACTCCAATTTCACGGCCGATGACTTCACCCGCCATGCCTCCGCTGCCATTGATTCCATCGTCCACCGTGATTGCCTTCCCATCATCGCCGGGGGCTCCAATTCCTATATCGAAGCCCTCGTCCAAGACGACGCTGCGTTTCGGGTGAAGTACGAGTGTTGCTTTCTCTGGGTGGACGTTCCCCTGCACGCCCTTGATCCATTCCTCTCGAAGCGGGTCGATCGGATGATTCAAGCGGGTCAGTTGGATGAGGTCCGTCAGTTTTTCGACCCGGCCCGGGATTACACTACCGGAATCAGAAAAGCCATTGGAGTCCCTGAATTTGATGAGTTTCTTCGAGCAGAGGCCACCGCCGATGAAGAGACCAAGAAGAGGTTACTAGAGGCAGCCATTGCCAAGATTAAAGCCAACAATTGCTCGCTGGCTCGTCGACAGCTTCAGAAGATTCATCGGTTTTACAACATGTGGAAGCGAAACATGTATCGCCTCGACGCGGCAGAGGTGTTCAAAAAATCCGGGGACGAGGCAGAGCAACTGTGGGAAACTCAAGTGCTTGCCAAGAGCCAGAGGATTGTACATAAGTTCCTCTACGACGACAGTCCGGTGGTTCCGGCAGCCTCGGCAATGTCATCGGTGACGCCGTATCCGCAGCCGAAGCAGGTGGCGATGGCCACCGCTAGTCATTAG 987 0.5542 MNIVSLSVCQQVRPLVNFQMALPIEPFFGHLRKDKVVVILGATGTGKSKLAIDLASSFPPAEIVNSDKMQVYQGLDITTNKVTDEECRGVPHHLLGITDANSNFTADDFTRHASAAIDSIVHRDCLPIIAGGSNSYIEALVQDDAAFRVKYECCFLWVDVPLHALDPFLSKRVDRMIQAGQLDEVRQFFDPARDYTTGIRKAIGVPEFDEFLRAEATADEETKKRLLEAAIAKIKANNCSLARRQLQKIHRFYNMWKRNMYRLDAAEVFKKSGDEAEQLWETQVLAKSQRIVHKFLYDDSPVVPAASAMSSVTPYPQPKQVAMATASH 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0306 328 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 260 - -
Acco04g0306 328 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 296 IPR039657 -
Acco04g0306 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 255 IPR027417 -
Acco04g0306 328 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
Acco04g0306 328 Pfam IPP transferase 150 247 - -
Acco04g0306 328 Pfam IPP transferase 70 143 - -
Acco04g0306 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 144 IPR027417 -
Acco04g0306 328 Gene3D - 33 296 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0306 Acco-ChrAcco04 2403438 2404424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0306 150 296 C2H2 Transcription Factor Family AT2G27760 31.429 6.38e-17 79.3