Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0294 ATGTATAATGCAGAGAAAAGGGGAAAGCGTCAGGTCATGATTAGGCCTTCCTCAAAAGTCATTATTAAGTTCCTTCTTGTCATGCAGAAGCATGGATACATTGGGGAGTTTGAATATGTGGATGACCACAGGGCTGGCAAAATTGTGGTTGAGCTGAATGGAAGATTGAATAAATGTGGGGTTATTAGTCCCCGTTTTGATGTGGGTGTCAAGGAGATAGAACCCTGGACTGCTAGGCTACTTCCCTCAAGACAGTTTGGCTACATTGTCTTGACAACCTCAGCTGGAATTATGGATCATGAAGAGGCCAGGAGGAAGAATGTTGGTGGGAAAGTGTTGGGTTTCTTTTACTAG 354 0.4379 MYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0294 117 SUPERFAMILY Ribosomal protein S8 2 117 IPR035987 GO:0003735|GO:0005840|GO:0006412
Acco04g0294 117 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 116 IPR000630 GO:0003735|GO:0005840|GO:0006412
Acco04g0294 117 ProSitePatterns Ribosomal protein S8 signature. 87 104 IPR000630 GO:0003735|GO:0005840|GO:0006412
Acco04g0294 117 Gene3D - 57 117 - -
Acco04g0294 117 Pfam Ribosomal protein S8 2 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Acco04g0294 117 Gene3D - 1 56 - -
Acco04g0294 117 FunFam 40S ribosomal protein S15a 57 117 - -
Acco04g0294 117 FunFam 40S ribosomal protein S15a 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0294 Acco-ChrAcco04 2297045 2297646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0294 1 117 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 97.436 5.57e-83 236