Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0245 ATGGACTGCAATAAAGAAGAGGCCTTACGGGCCAAGGTCATTGCCGAAAAGAAGATGGAAAGTAAAGATTTCACTGGAGCTCGTAAAATTGCTCTTAAAGCCCAGCAACTATATCCTGACCTGGAGAATATAACTCAAATGCTTATTGTATGTGATGTGCATTGCTCTGCTGAGCAGAAATTGTTTGGGAATGAGATGGATTGGTATGGAATTCTTCAAATTGGGCAGTCAGCTGATGAGGCAATGATAAAGAAGCAATACAGAAAGTTTGCCCTCCAACTTCATCCTGACAAGAACAAGTTTTCTGGTGCAGAAGCTGCATTTAAGCTAATTGGAGAAGCCCAACGAGTGCTTTTGGACAAAAGTAAACGTTCTGTACTTGACATGAAGTACAGAGTTCATACGAACAGAACTACAAGGCCGTATCAGCCGGCACAGAAGTTTCATACAACTGTGGTGCAAAGCAATGTCAGGGCCAATTTTTCCAACATAAATCCTCAGAAGCAGCAGCAGCAGCAGCCTCCACCTAGGCAATCAACTCAGCAGGGGCCCAATGGCAGCCGTCCTACATTTTGGACTATCTGCCCATATTGTTCTAGTAGATATGAGTTTCACTTTGAAGCTGTGAATAGATCTGTTTCCTGTCACACTTGTCATAGGTCCTTTGTTGCATATGTGCAAGGTACGTCAGTGGCTGCTAATTCAAGTCATCAAGCTTTTGGCCAACAAAAAGATGGTTTAAATCATGGCGTTAATGTTGGATCTCAAGGTATGAATGCTGGGAATCTCAATACAAGGCCTTCTGCACAAAAAGGCCACTATGTCTCTGATAAGCTGAATCAAAAGAGGAAGAGGAAGAAGGTAGAAGAATCTAGTGAAAGTGCTGATTCCCTAGACAGCAATGATTCTGAAGATGATATGGTTGTTGACAAGGATGGTGTTTTTGGTGAACAAAACCATCCAACTGATCGACGTAGATCTACAAGGTCTAAACCTCAGGTTGTTTATGACGAGAATGGGAGTGATGACAATGAAGACCTTTTAAAGCCTTCAACAGGGTTCAAGGGAAGTGGCTCATGTGGTGCAGGAGAAGACAATGGGGAGACAGCTAAAATGAATAATCGTAATGGCTCGGCTGCTGACACGAAAGGTGATCAGAAAGAGGTGAAACAGAAAAACAATCGTTATACTGAAGAGAGCTTACACAAGGGAAATGAGGAAAGTCTGAACACGAGGGGAAAAGAAGCAAACAAGTGCTCAAAGGGGACAGGAGAAGCAGCAGAAGCTCCAACCTTTTATGTCTTACCTGATTCACAGTTCAGTGACTTTGAAATGGACAAGAAAGAAGATAGTTTTGCAAATGGACAGATTTGGGCCATATATGACACAATTGATGGCATGCCGAGATTCTATGCTTTGATCAGGAAAGTTCTCTCTCCTGGGTTCAAGCTGCGAATAACATGGTTTGAAGCAGATCCAGATGACGAGGATGAAATCAACTGGGTAGAAAACGATCTGCCAGTTGCTTGTGGGAACTATGTGCTTGGCCACACCGAAGTTACTGAAGATCGTCTTATGTTCTCACATCTGATTTTGTGTGAAAAGATTAGCCGCAATACTTTTAAAGTTTTTCCTAGGAAGGGGGAAACCTGGGCTGTGTTTAAAAATTGGGATATCAAATGGTACACCGATGTGAAATCTCATCAGAAGTATGAATTTGACTACGTTGAAATTGTGTCAGATTATGTTGAAGGAGAGGGCGTCTCTGTTGCATACTTGGAGAAGTTGAAAGATTTTGTGAGTCTCTTCACGCGAGCTAACAAGGGCGGTAAGGATTCAATTCAAATTCCATCAGTGGAGTTATTTAGATTCTCTCATAGGATTCCTTCATTTAAAATGACTGGTCAGGAAGGAGTAGGTGTCCCTAAAGGATCTTTTGAACTTGATTCTGCATCTTTGCCGGACAATCTTTGA 1974 0.422 MDCNKEEALRAKVIAEKKMESKDFTGARKIALKAQQLYPDLENITQMLIVCDVHCSAEQKLFGNEMDWYGILQIGQSADEAMIKKQYRKFALQLHPDKNKFSGAEAAFKLIGEAQRVLLDKSKRSVLDMKYRVHTNRTTRPYQPAQKFHTTVVQSNVRANFSNINPQKQQQQQPPPRQSTQQGPNGSRPTFWTICPYCSSRYEFHFEAVNRSVSCHTCHRSFVAYVQGTSVAANSSHQAFGQQKDGLNHGVNVGSQGMNAGNLNTRPSAQKGHYVSDKLNQKRKRKKVEESSESADSLDSNDSEDDMVVDKDGVFGEQNHPTDRRRSTRSKPQVVYDENGSDDNEDLLKPSTGFKGSGSCGAGEDNGETAKMNNRNGSAADTKGDQKEVKQKNNRYTEESLHKGNEESLNTRGKEANKCSKGTGEAAEAPTFYVLPDSQFSDFEMDKKEDSFANGQIWAIYDTIDGMPRFYALIRKVLSPGFKLRITWFEADPDDEDEINWVENDLPVACGNYVLGHTEVTEDRLMFSHLILCEKISRNTFKVFPRKGETWAVFKNWDIKWYTDVKSHQKYEFDYVEIVSDYVEGEGVSVAYLEKLKDFVSLFTRANKGGKDSIQIPSVELFRFSHRIPSFKMTGQEGVGVPKGSFELDSASLPDNL 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0245 657 Gene3D DnaJ domain 64 178 IPR036869 -
Acco04g0245 657 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Acco04g0245 657 MobiDBLite consensus disorder prediction 166 187 - -
Acco04g0245 657 SMART dnaj_3 66 123 IPR001623 -
Acco04g0245 657 Pfam Domain of unknown function (DUF3444) 433 637 IPR024593 -
Acco04g0245 657 MobiDBLite consensus disorder prediction 241 275 - -
Acco04g0245 657 SUPERFAMILY Chaperone J-domain 63 134 IPR036869 -
Acco04g0245 657 CDD DnaJ 67 120 IPR001623 -
Acco04g0245 657 MobiDBLite consensus disorder prediction 241 423 - -
Acco04g0245 657 MobiDBLite consensus disorder prediction 307 349 - -
Acco04g0245 657 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 657 - -
Acco04g0245 657 Pfam DnaJ domain 67 128 IPR001623 -
Acco04g0245 657 MobiDBLite consensus disorder prediction 381 421 - -
Acco04g0245 657 PRINTS DnaJ domain signature 87 102 IPR001623 -
Acco04g0245 657 PRINTS DnaJ domain signature 69 87 IPR001623 -
Acco04g0245 657 PRINTS DnaJ domain signature 103 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0245 Acco-ChrAcco04 1994655 1996628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0245 4 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.071 1.29e-28 115