Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0239 ATGAACCAGTACCACATCTACGAAGCCATTGGTCGCGGCAAATATTCGACTGTGTACAAAGGCAGGAAGAAGAAGACCATTGAGTATTTTGCGATTAAGAGCGTTGATAAGTCGCAGAAAAGCAAAGTTCTTCAAGAAGTCAGGATTCTCCACTCCTTAGATCATCAAAACGTACTCAAATTTTATTCTTGGTATGAAACTTCTGCTCACCTATGGCTGGTCCTGGAGTATTGCGTTGGAGGAGATTTGCTTGCCTTATTACAGCAGGATAACCATCTACCTGAAGATTCAATTCACGGTCTTGCTCATGACCTAGTCAGAGCTTTGCAGTATTTACATTCAAATGGAATAATATATTGCGACTTGAAACCTTCAAATATTCTGCTAGATGAAAATGGATGTGCAAAGCTTTGTGATTTTGGCTTGGCTAGAAAATTGAAAGATATATCAAAAATTCCTTCATCCTCGTTGCCGCAAGCAAAACGTGGAACACCCTCCTATATGGCTCCGGAGCTTTTTGAGGATGGTGGAGTACATTCATATGCATCTGATTTTTGGGCCCTGGGTTGTGTCCTATACGAATGTTATACTGGAAGACCGCCCTTTGTTGGAAGAGAATTCACTAAACTGGTGAAATCCATCATTTCAGATCCAACTCCACCACTCCCTGGTAATCCAAGTCGCCCTTTTGTCAATTTGATTAATTCTCTATTGGTAAAAGATCCAGCTGAAAGAATACAATGGCCTGAGCTTTGTGGGCACGCATTTTGGAAAACCAAAGTGAATATGGTGTCTCTACCGCCGCAAACTGCTTTTGATGATATGATAGAACTTCATGCTAAACCATGTTTATCAGAACGTAATGGTGACAAATCCTCCCAAAACAAAATTCCTCCCAAATCTCGAGAAAAAGATATGAGAGGGTTGTTGAAGCAGGATGAGAATTCTATTATGGGACCGAGAGGTCACGATACACCTACTAGGGGTCCACCAAATGGGCATAGAACTCAAATAAAGGGTTTGGGCAAAACAACTGAGGTGAGGCAGAAAGATGCTTCCAATGCTAGCAAGGCTATGAACCTTTTGAGACTCTCAAGAATAGCTAAATCGAATTTACAGAAGGAAAATGAGAAAGAAAATTACAGACGCCCCTTGCCTAATAGCTCTGATAATGGCTCTGAAGTTAAAATTGAGAATACTGACATGGAACTTGATTTTAATGAAAATACAGAAGATGATGCGCATGATGAAATTGATGGTTCTGATCATACAACTTCTGTGCCATATGAGAAGTTGTCCATTATAAATCAAAATCAAGGGAAACCTGAGGAAATGGAAAGTAATAATCAGTTAGACACCCCTTCTGTTGTTAACACACCCAACTCAGATGATTCAAGGTCTCTTGATCCAGAATCAAATCCTGAGCATCCTGACAAGTCTTCTATCTCTCCCAGTGTGAGCCCCCAGGTCAGGAAGCATAGGGTTAAAGAAGACTTGGGATCTGCACTTGATTTTGATTCTTCGAGGTCTTCTGGTAACATTTCCCAAGTTATTTGGCATCAATCTGATCTCTCAGTTAGACCTGTAATGCCTAGTAGAAAAATTGATAAAGAGGTCATCCCTTCACTGCCTTTTGAGGCTTTTACCGTGTCTGATTTTGTAAAGATGTCTAAAGGACAATTGGATACTATCCAGAACCGAATTGTAGCAATTCTTAATGGGAACTCCATTATTGGGGAGAAACAGAATGTCATCAGATTCCTTGAAATGTTGAGCAATAATGCTGATGCAGCTAACATCTTGACAAATGGGCCAATAATGCTCACACTTGCAAAATTGCTTCGTCAGTCCAAGGCTTCAGCTTTACGTGTTCAACTTGCTTCGCTGATTGGTTTGTTGATACGGCACTCTACTTATATTGATGACAGTTTGGCTAATAGTGGAATTTTAAGTTCACTGACTGATGGCCTTAGAGACAAGCAGGACAAAGTGAGGAGGTTTTCCATGGCTGCTTTAGGTGAGTTACTATTCTACATATCAACTCAAAATGAGGACAGTAGAGATAACAATCAGCTTGAATCTCCATCGAAGGACAATCGGGCTGCATTTGGCTGGCAGGTTCCAAATTCATTGATATCTTTTGTGTCATCACTTTTGCGGAAGGGAGAAGATGATATAACACAGTTGTATGCATTGAGGACAATTGAGAATATTTGCAGTCAAGGAGGGGTATGGGTGGGTCGATTTACCAGTCAAGATATCATTTCCAATTTGTCTTACATTTATAGGGCAGCAGGAAAACAAGAGAGCATGAGGCTTACTGCAGGGTCATGTTTGGTGCGCTTAGTTCGTTTCAATCCTCCTAGCATTCAGCCAGTTATTGAGAAACTCTCATTTAAGGACCTAGCATCTGCTCTTGTCAAGGGTAGTCCTCGTGAGCAGCAAATCAGCTTAAATATTCTTAGCATGGCAATGCTTGGAAGTCATATGTTCCCTAATATTGGACGATACCTTCTGCAACTTGTTGAGGATAAGAATTTGATCCCAAGCCTTTTGGCTCTTATCGAGCAAGGTAGTGAAGTTTTAAAGGGAAAGGCACTTGTTTTTGTGGCTCTTCTTTGTAAAGCTGGTAGGAGGTGGCTTCCACACTTCTTATGCAGTCCGAAATTGCTTTCAGTGGTGGACAGGTTGGTAAAAGAGAAAGAAGCCTTTGTGCGGCAGTGTTTAAATGCATTCTTGCATATTGTTGCCTCTACTATTCCTGGTTTACTGGATACTATAACCGGGGATATCCAACAAATGATGGCAGGAAGGCGTCATGGACATATCTCTTCCCTTACTTGCAGGTCTGCTCCAAAAACCAACATTCATTTGTTCCCTGTTGTCCTTCATCTTCTAGGGAGTTCAATATTTAAGCACAAAGTGGCGACTCACCAAGTATTGCAGCAGTTGGCAAACCTTGTTAAACTCGTGGAGACACCATTTCAGGGCAGAGATGACTTCCAGATAACCCTTCTTCGAGTTATGGAGTCTCTTACAGAGGAGTCTTCTGTGATTTTTGGGAACCCTGACCTTTTCATACGTGAAATCCTCCCTAGCTTAACTATTCTGTACAAGGGAAACAAAGATGGTGATGCCAGATTTCTGTGCCTTAAGATTCTCTTTGATGTGATGGTCATTATTTTGAGTGAACCAATTGAAGATGAACAAAGATTGAAGGACTTGAAGTCTGTATCAAATACCCATTTTCTACCTCTCTACCCGACCTTGGTTGAAGATGAGGATCCTATTCCTATGTATGCACAAAAGCTTCTTGTGATGTTATTGGAATTCGGGTTTATTAAAATTCCAGACATTCTGCATCTGAAGACAATCTCACAATGTTTTGAGTTCTTGCTTGGCGATCTCTCAAATGCGAATGTTAACAATGTTAAGTTGTGTTTGGCTCTTGCTTCTGCTCCTGAAATGGATTCCAAGTTACTCTCTCAACTAAAAGTAGTTAGGAGAATTGGCAATTTTCTGGAGTTTGTATACGCAAAGAGTATGGAAGATTTCTTGGAGCCAACTCTTGGACTTTGCAGGGCTTTTCTTGCACGTTCAGTCAGAAGTGTAAAAGCCGCTAATTGCTCAGCAGAACTTGCTCTCTTAGGTGAATGTTCTTCTGAGGCGAGTGGTGCAATTGATCCTCCACAATGTGTAAGAGATATAATGGACTTTGGAAGCAACGTTGGTGTCTTGCTGGAGTTGAGTGGATCTAATGAATCCAACATTGCCGACATAGCTTCTGAATGTATGATTTTACTATTCAAGGCAGCTCCAAGAGAAGCCACCACTGGTCTATTAACCAAGCTCTCTAAGGTTAGTGTGATCTTAGAGTCCTGGCGAAAAGAAACCTGTCACGTGTTGGTGAGCCGAATGCTACATGCTTTAGGTTATGCCTGCAGGCAATACTTGTTGCATGCAATGATATTATCAATATCCATACCAGAAATTTCAAGAATTGAAATGATCGTTTCCGAACTCAAAAGTTCAGGTGTCCATGATTTGGCCAAAACAGCTGGATTAGCAGCTCTGGAGTTGCAGCGGCTGCCTCGCTGCCGCTAA 4104 0.413 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRILHSLDHQNVLKFYSWYETSAHLWLVLEYCVGGDLLALLQQDNHLPEDSIHGLAHDLVRALQYLHSNGIIYCDLKPSNILLDENGCAKLCDFGLARKLKDISKIPSSSLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYTGRPPFVGREFTKLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWKTKVNMVSLPPQTAFDDMIELHAKPCLSERNGDKSSQNKIPPKSREKDMRGLLKQDENSIMGPRGHDTPTRGPPNGHRTQIKGLGKTTEVRQKDASNASKAMNLLRLSRIAKSNLQKENEKENYRRPLPNSSDNGSEVKIENTDMELDFNENTEDDAHDEIDGSDHTTSVPYEKLSIINQNQGKPEEMESNNQLDTPSVVNTPNSDDSRSLDPESNPEHPDKSSISPSVSPQVRKHRVKEDLGSALDFDSSRSSGNISQVIWHQSDLSVRPVMPSRKIDKEVIPSLPFEAFTVSDFVKMSKGQLDTIQNRIVAILNGNSIIGEKQNVIRFLEMLSNNADAANILTNGPIMLTLAKLLRQSKASALRVQLASLIGLLIRHSTYIDDSLANSGILSSLTDGLRDKQDKVRRFSMAALGELLFYISTQNEDSRDNNQLESPSKDNRAAFGWQVPNSLISFVSSLLRKGEDDITQLYALRTIENICSQGGVWVGRFTSQDIISNLSYIYRAAGKQESMRLTAGSCLVRLVRFNPPSIQPVIEKLSFKDLASALVKGSPREQQISLNILSMAMLGSHMFPNIGRYLLQLVEDKNLIPSLLALIEQGSEVLKGKALVFVALLCKAGRRWLPHFLCSPKLLSVVDRLVKEKEAFVRQCLNAFLHIVASTIPGLLDTITGDIQQMMAGRRHGHISSLTCRSAPKTNIHLFPVVLHLLGSSIFKHKVATHQVLQQLANLVKLVETPFQGRDDFQITLLRVMESLTEESSVIFGNPDLFIREILPSLTILYKGNKDGDARFLCLKILFDVMVIILSEPIEDEQRLKDLKSVSNTHFLPLYPTLVEDEDPIPMYAQKLLVMLLEFGFIKIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMDSKLLSQLKVVRRIGNFLEFVYAKSMEDFLEPTLGLCRAFLARSVRSVKAANCSAELALLGECSSEASGAIDPPQCVRDIMDFGSNVGVLLELSGSNESNIADIASECMILLFKAAPREATTGLLTKLSKVSVILESWRKETCHVLVSRMLHALGYACRQYLLHAMILSISIPEISRIEMIVSELKSSGVHDLAKTAGLAALELQRLPRCR 1367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0239 1367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Acco04g0239 1367 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1365 IPR044591 GO:0000911|GO:0000914|GO:0008017
Acco04g0239 1367 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0239 1367 FunFam Aurora kinase A 1 81 - -
Acco04g0239 1367 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Acco04g0239 1367 MobiDBLite consensus disorder prediction 439 467 - -
Acco04g0239 1367 Gene3D - 566 917 IPR011989 -
Acco04g0239 1367 MobiDBLite consensus disorder prediction 283 358 - -
Acco04g0239 1367 MobiDBLite consensus disorder prediction 370 384 - -
Acco04g0239 1367 CDD STKc_ULK4 3 257 - -
Acco04g0239 1367 MobiDBLite consensus disorder prediction 296 311 - -
Acco04g0239 1367 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Acco04g0239 1367 MobiDBLite consensus disorder prediction 338 358 - -
Acco04g0239 1367 FunFam Maternal embryonic leucine zipper kinase 1 288 - -
Acco04g0239 1367 MobiDBLite consensus disorder prediction 439 495 - -
Acco04g0239 1367 Gene3D Transferase(Phosphotransferase) domain 1 1 313 - -
Acco04g0239 1367 MobiDBLite consensus disorder prediction 370 403 - -
Acco04g0239 1367 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0239 1367 SUPERFAMILY ARM repeat 564 917 IPR016024 -
Acco04g0239 1367 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0239 Acco-ChrAcco04 1933394 1940062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0239 1 246 AGC Kinase Gene Family AT1G45160 35.145 7.57e-38 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Acco04g0239 Pkinase 2.4e-66 CL0016